Gene detail information of Glyur000142s00009083 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46225.1 | 3.00E-93 | ABI-1-like 1 |
| NR | XP_004494773.1 | 6.87E-179 | PREDICTED: protein ABIL1-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q8S8M5|ABIL1_ARATH | 6.00E-115 | Protein ABIL1 |
| trEMBL | tr|G7L308|G7L308_MEDTR | 4.00E-168 | ABIL1-like protein {ECO:0000313|EMBL:AES82732.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00142 | 9624 | 13122 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.062 |
| SRR1783600 | control | 3.802 |
| SRR1783602 | moderate drought stress | 4.166 |
| SRR1811619 | moderate drought stress | 4.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.606 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.650 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.084 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.799 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.669 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.910 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.350 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.478 |
| SRR2868004 | Drought Stress (root) | 18.696 |
| SRR2967015 | Control (root) | 17.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.626 |
| SRR9715740 | Leaf | 12.311 |
| SRR9715741 | Leaf | 12.641 |
| SRR9715739 | Root | 1.510 |
| SRR9715742 | Root | 5.436 |
| SRR9715743 | Root | 4.270 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.478 |
| SRR8749028 | MeJA induced 9h | 8.588 |
| SRR8749029 | MeJA induced 9h | 8.191 |
| SRR8749030 | Uninduced | 7.176 |
| SRR8749031 | Uninduced | 2.483 |
| SRR8749032 | Uninduced | 3.210 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.540 |
| SRR8400027 | Control - Root | 17.884 |