Gene detail information of Glyur000141s00009817 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G24080.2 | 4.00E-80 | KRR1 family protein |
| NR | XP_003547330.1 | 0 | PREDICTED: protein KRI1 homolog [Glycine max] |
| trEMBL | tr|I1MG49|I1MG49_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G13850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00141 | 112218 | 114248 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000141s00009817.1 | PF05178.7 | Kri1 | 347 | 450 | 1.40E-21 |
| Glyur000141s00009817.1 | PF12936.2 | Kri1_C | 511 | 597 | 5.00E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.630 |
| SRR1783600 | control | 14.785 |
| SRR1783602 | moderate drought stress | 15.794 |
| SRR1811619 | moderate drought stress | 15.857 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.087 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.609 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.634 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.457 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.749 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.611 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.534 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.796 |
| SRR2868004 | Drought Stress (root) | 17.588 |
| SRR2967015 | Control (root) | 16.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.407 |
| SRR9715740 | Leaf | 11.140 |
| SRR9715741 | Leaf | 9.992 |
| SRR9715739 | Root | 0.692 |
| SRR9715742 | Root | 7.265 |
| SRR9715743 | Root | 6.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 50.555 |
| SRR8749028 | MeJA induced 9h | 33.538 |
| SRR8749029 | MeJA induced 9h | 30.491 |
| SRR8749030 | Uninduced | 16.428 |
| SRR8749031 | Uninduced | 17.009 |
| SRR8749032 | Uninduced | 11.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.741 |
| SRR8400027 | Control - Root | 16.555 |