Gene detail information of Glyur000141s00009801 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004491308.1 | 2.99E-91 | PREDICTED: uncharacterized protein LOC101501024 [Cicer arietinum] |
| COG | YP_005440669.1 | 3.00E-31 | hypothetical protein CLDAP_07320 [Caldilinea aerophila DSM 14535 = NBRC 104270] |
| trEMBL | tr|K7KBA4|K7KBA4_SOYBN | 3.00E-93 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G45251.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00141 | 28161 | 28721 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000141s00009801.1 | PF13671.1 | AAA_33 | 1 | 138 | 2.00E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.541 |
| SRR1783600 | control | 22.687 |
| SRR1783602 | moderate drought stress | 163.073 |
| SRR1811619 | moderate drought stress | 160.544 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.469 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.936 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.299 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.752 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.468 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 30.381 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.157 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.157 |
| SRR2868004 | Drought Stress (root) | 19.715 |
| SRR2967015 | Control (root) | 19.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.278 |
| SRR9715740 | Leaf | 20.469 |
| SRR9715741 | Leaf | 14.309 |
| SRR9715739 | Root | 40.143 |
| SRR9715742 | Root | 14.736 |
| SRR9715743 | Root | 17.529 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.493 |
| SRR8749028 | MeJA induced 9h | 1.909 |
| SRR8749029 | MeJA induced 9h | 2.677 |
| SRR8749030 | Uninduced | 1.054 |
| SRR8749031 | Uninduced | 1.361 |
| SRR8749032 | Uninduced | 6.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.442 |
| SRR8400027 | Control - Root | 16.775 |