Gene detail

Gene detail information of Glyur000141s00009796

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G32910.1	6.00E-118	HXXXD-type acyl-transferase family protein
NR	XP_003617368.1	0	Acetyltransferase, putative [Medicago truncatula]
Swissprot	tr\|Q9FI78\|HST_ARATH	1.00E-33	Shikimate O-hydroxycinnamoyltransferase
trEMBL	tr\|G7K3A2\|G7K3A2_MEDTR	0	HXXXD-type acyl-transferase family protein {ECO:0000313\|EMBL:AET00327.1}

Sequence

Transcript Sequence

>Glyur000141s00009796.1
ATGTGCATTGGGAAAAAAGAATTCACGGTGAGTGTGACCAAGGAGGAGGTGGTGGCGGCGGTGTTGCCAATGCAACAACACTGGCTACCACTATCAAACCTTGATCTCCTTCTTCCCGCACTGGACGTTGGCGTATTCTTTTGCTACGACAAAATCAGTGGCACCAACAACAACCACAGCACCATGGTGGGGTCATTGAAAAGTGCCTTGGCTCAGGCTTTGGTTTCCTACTACGCCTTTGCGGGTGAAGTGGTGTTCAATTCCATGGGTGAACCGGAACTACTTTGCAATAACCGTGGTGTGGATTTTGTTGAGGCTGTTGCTGACGTGGAGCTTCGGTCCCTTGATTTGTACAACCCGGACGACACCGTTGAAGGGAAGCTTGTTCCAACCAAGAAACATGGCGTCCTTGCTGTTCAGGCAACTTGGCTGAAATGTGGCGGCTTAGTAGTGGCATGCNCTTTTGACCACCGCATCGCTGACGCCTATTCGGCAAACATGTTCCTCGTATCATGGGCNGAGATGGCCAGGCCCGGGCCCAACAAGCCCACGAGCCCGACACTGCAGCCCTGTTTCCGACGCTCCCTTCTCACCCCACGACGCCCACCTTCCATAGACCCTTCATTCNACGAAATGTACATCCCCATCACGGACCTCCCTCCTCCACCACCCGAACCCAAGTCTAAACCCGACCCTCTCATCAGTCGCATATACCACGTGACTAGCGAACAACTCAATCACATGCAATCACTTGCCAACCACTCAAACATTAACAGCGCCGCNGCGCCCAGCAAGAGGACAAAGTTGGAGTCCTTTTCTGCTTTCTTGTGGAAAATGGTTGCCGCGGCTGCTACCGCGGAAAGCGCTAATGACGGTAGTAAGGAAAAGGTGGTTGCCAAGATGGGCGTGGTGGTTGANGGAAGAAAGAGGCTCNGTAGCGGCAATAAGGACAAGGAGGCAATCATGGACTCGTATTTTGGGAACGTGCTTTCGATACCGTATGGTGGAAATTCGGTGGAGGAGCTAGTGGAAAGGCCGTTGGGTTGGGTGGCGGAGCAAGTTCACGAGTTTCTTGAGACGGCGGTGACGGAAGAGCATTTCTTGGAGCTTATTGATTGGGTGGAGGCGCACCGGCCGGTTCCCGGGTTGGCGAGGATTTATTGCAGTGGCACGGAGGAGGAAGATGGAGGAGGATCAGTGGCTTTTGTGGTGTCTTCGGGGCAGAGGTTTCCGGTAACGAAGGTGGACTTTGGGTGGGGGAAGCCTGTGTTCGGGNCATACCATTTCCCTTGGGGTGGAGACGCTGGCTATGTCATGCCAATGCCTAGTCCCAAAGGGAATGGTGATTGGCTTGTCTACATGCACTTTCCAAAGAGACACTTGCACTTCATGGAATCNCGGGCTCCCCATTTCTTTAGGCCCTTCTCTTGGGATTATTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00141	3214	5431	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000141s00009796.1	PF02458.10	Transferase	8	467	2.10E-97

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.878
SRR1783600	control	0.855
SRR1783602	moderate drought stress	1.352
SRR1811619	moderate drought stress	1.325

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.128
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.128

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	321.280
SRR2868004	Drought Stress (root)	174.512
SRR2967015	Control (root)	171.262

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.171
SRR9715740	Leaf	0.075
SRR9715741	Leaf	0.045
SRR9715739	Root	29.371
SRR9715742	Root	7.057
SRR9715743	Root	9.578

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	24.251
SRR8749028	MeJA induced 9h	25.471
SRR8749029	MeJA induced 9h	16.480
SRR8749030	Uninduced	38.939
SRR8749031	Uninduced	28.299
SRR8749032	Uninduced	21.999

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.841
SRR8400027	Control - Root	16.958