Gene detail information of Glyur000140s00011486 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G66230.1 | 3.00E-36 | Chalcone-flavanone isomerase family protein |
| NR | XP_003517176.1 | 4.43E-118 | PREDICTED: uncharacterized protein LOC100818852 [Glycine max] |
| trEMBL | tr|I1J8L4|I1J8L4_SOYBN | 2.00E-118 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G37130.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00140 | 271222 | 272713 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.520 |
| SRR1783600 | control | 1.525 |
| SRR1783602 | moderate drought stress | 1.157 |
| SRR1811619 | moderate drought stress | 1.127 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.679 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.480 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.862 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.107 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.358 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.878 |
| SRR2868004 | Drought Stress (root) | 8.342 |
| SRR2967015 | Control (root) | 9.280 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.400 |
| SRR9715740 | Leaf | 0.304 |
| SRR9715741 | Leaf | 1.556 |
| SRR9715739 | Root | 0.646 |
| SRR9715742 | Root | 1.233 |
| SRR9715743 | Root | 0.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.446 |
| SRR8749028 | MeJA induced 9h | 8.993 |
| SRR8749029 | MeJA induced 9h | 10.249 |
| SRR8749030 | Uninduced | 0.109 |
| SRR8749031 | Uninduced | 0.066 |
| SRR8749032 | Uninduced | 0.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.106 |
| SRR8400027 | Control - Root | 5.415 |