Gene detail information of Glyur000140s00011485 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17930.1 | 0 | Phosphatidylinositol 3- and 4-kinase family protein with FAT domain |
| NR | XP_007157918.1 | 0 | hypothetical protein PHAVU_002G108900g [Phaseolus vulgaris] |
| trEMBL | tr|V7CI88|V7CI88_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW29912.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00140 | 244704 | 270901 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000140s00011485.1 | PF02259.18 | FAT | 2765 | 3103 | 7.90E-43 |
| Glyur000140s00011485.1 | PF00454.22 | PI3_PI4_kinase | 3522 | 3766 | 1.80E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.832 |
| SRR1783600 | control | 15.862 |
| SRR1783602 | moderate drought stress | 24.461 |
| SRR1811619 | moderate drought stress | 24.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.548 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.375 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.779 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.460 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.421 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.540 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.765 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.767 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.454 |
| SRR2868004 | Drought Stress (root) | 37.805 |
| SRR2967015 | Control (root) | 39.873 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.787 |
| SRR9715740 | Leaf | 12.467 |
| SRR9715741 | Leaf | 11.135 |
| SRR9715739 | Root | 4.779 |
| SRR9715742 | Root | 35.880 |
| SRR9715743 | Root | 30.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.808 |
| SRR8749028 | MeJA induced 9h | 14.993 |
| SRR8749029 | MeJA induced 9h | 6.772 |
| SRR8749030 | Uninduced | 7.774 |
| SRR8749031 | Uninduced | 6.558 |
| SRR8749032 | Uninduced | 7.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.321 |
| SRR8400027 | Control - Root | 29.945 |