Gene detail information of Glyur000140s00011483 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17940.1 | 1.00E-17 | Plant protein of unknown function (DUF827) |
| NR | XP_003612163.1 | 3.94E-116 | hypothetical protein MTR_5g021990 [Medicago truncatula] |
| Swissprot | tr|O48822|Y2794_ARATH | 2.00E-31 | WEB family protein At2g17940 |
| trEMBL | tr|G7JW73|G7JW73_MEDTR | 1.00E-116 | WEB family plant protein {ECO:0000313|EMBL:AES95121.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00140 | 237239 | 238569 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.404 |
| SRR1783600 | control | 0.372 |
| SRR1783602 | moderate drought stress | 0.213 |
| SRR1811619 | moderate drought stress | 0.214 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.336 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.802 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.074 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.080 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.248 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.436 |
| SRR2868004 | Drought Stress (root) | 1.288 |
| SRR2967015 | Control (root) | 1.856 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.402 |
| SRR9715740 | Leaf | 0.071 |
| SRR9715741 | Leaf | 0.176 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 2.358 |
| SRR9715743 | Root | 2.656 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.080 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.019 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.820 |
| SRR8400027 | Control - Root | 2.917 |