Gene detail information of Glyur000140s00011480 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17990.1 | 2.00E-99 | |
| NR | XP_003517179.1 | 0 | PREDICTED: uveal autoantigen with coiled-coil domains and ankyrin repeats protein-like [Glycine max] |
| trEMBL | tr|I1J8L8|I1J8L8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G37180.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00140 | 226685 | 230244 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.706 |
| SRR1783600 | control | 5.835 |
| SRR1783602 | moderate drought stress | 6.005 |
| SRR1811619 | moderate drought stress | 6.135 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.367 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.454 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.753 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.290 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.503 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.462 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.573 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.424 |
| SRR2868004 | Drought Stress (root) | 18.979 |
| SRR2967015 | Control (root) | 15.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.137 |
| SRR9715740 | Leaf | 5.413 |
| SRR9715741 | Leaf | 7.160 |
| SRR9715739 | Root | 0.886 |
| SRR9715742 | Root | 6.201 |
| SRR9715743 | Root | 5.452 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.186 |
| SRR8749028 | MeJA induced 9h | 11.831 |
| SRR8749029 | MeJA induced 9h | 10.120 |
| SRR8749030 | Uninduced | 11.807 |
| SRR8749031 | Uninduced | 8.522 |
| SRR8749032 | Uninduced | 6.357 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.912 |
| SRR8400027 | Control - Root | 16.908 |