Gene detail information of Glyur000140s00011477 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G21220.1 | 1.00E-40 | SAUR-like auxin-responsive protein family |
| NR | XP_006590723.1 | 1.94E-64 | PREDICTED: auxin-induced protein 15A-like [Glycine max] |
| Swissprot | tr|P33081|AX15A_SOYBN | 6.00E-24 | Auxin-induced protein 15A |
| trEMBL | tr|I1LI08|I1LI08_SOYBN | 7.00E-65 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G08070.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00140 | 198420 | 198743 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000140s00011477.1 | PF02519.9 | Auxin_inducible | 17 | 104 | 1.30E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.750 |
| SRR1783600 | control | 0.594 |
| SRR1783602 | moderate drought stress | 2.050 |
| SRR1811619 | moderate drought stress | 2.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.440 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.305 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.713 |
| SRR2868004 | Drought Stress (root) | 17.828 |
| SRR2967015 | Control (root) | 7.374 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.203 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 4.753 |
| SRR9715742 | Root | 1.215 |
| SRR9715743 | Root | 3.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.344 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.035 |
| SRR8400027 | Control - Root | 17.065 |