Gene detail information of Glyur000140s00011474 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_002617052.1 | 6.45E-41 | 60S ribosomal protein L2 [Clavispora lusitaniae ATCC 42720] |
| trEMBL | tr|I3S9N7|I3S9N7_MEDTR | 2.00E-32 | Uncharacterized protein {ECO:0000313|EMBL:AFK36979.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00140 | 186579 | 187885 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 190.488 |
| SRR1783600 | control | 188.480 |
| SRR1783602 | moderate drought stress | 168.130 |
| SRR1811619 | moderate drought stress | 166.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 317.672 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 312.298 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 161.553 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 119.359 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 269.509 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 258.829 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 98.253 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 96.511 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 61.107 |
| SRR2868004 | Drought Stress (root) | 43.944 |
| SRR2967015 | Control (root) | 48.686 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.101 |
| SRR9715740 | Leaf | 12.683 |
| SRR9715741 | Leaf | 34.950 |
| SRR9715739 | Root | 144.457 |
| SRR9715742 | Root | 84.477 |
| SRR9715743 | Root | 34.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.820 |
| SRR8749028 | MeJA induced 9h | 11.039 |
| SRR8749029 | MeJA induced 9h | 76.695 |
| SRR8749030 | Uninduced | 7.147 |
| SRR8749031 | Uninduced | 3.798 |
| SRR8749032 | Uninduced | 17.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.408 |
| SRR8400027 | Control - Root | 9.971 |