Gene detail information of Glyur000140s00011443 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G36210.3 | 0 | Protein of unknown function (DUF726) |
| NR | XP_004512100.1 | 0 | PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7KGC8|G7KGC8_MEDTR | 0 | Transmembrane and coiled-coil protein {ECO:0000313|EMBL:AES95070.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00140 | 30255 | 37271 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000140s00011443.1 | PF05277.7 | DUF726 | 306 | 654 | 2.00E-92 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.138 |
| SRR1783600 | control | 16.243 |
| SRR1783602 | moderate drought stress | 16.240 |
| SRR1811619 | moderate drought stress | 16.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.300 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.889 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.429 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.333 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.565 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.362 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.853 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.838 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.263 |
| SRR2868004 | Drought Stress (root) | 34.192 |
| SRR2967015 | Control (root) | 33.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.013 |
| SRR9715740 | Leaf | 6.035 |
| SRR9715741 | Leaf | 8.797 |
| SRR9715739 | Root | 5.508 |
| SRR9715742 | Root | 10.638 |
| SRR9715743 | Root | 10.295 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.136 |
| SRR8749028 | MeJA induced 9h | 22.696 |
| SRR8749029 | MeJA induced 9h | 18.947 |
| SRR8749030 | Uninduced | 19.590 |
| SRR8749031 | Uninduced | 13.363 |
| SRR8749032 | Uninduced | 12.655 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.964 |
| SRR8400027 | Control - Root | 22.041 |