Gene detail

Gene detail information of Glyur000139s00009304

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G26935.1	3.00E-130	DHHC-type zinc finger family protein
NR	XP_004501727.1	0	PREDICTED: probable S-acyltransferase At3g26935-like [Cicer arietinum]
Swissprot	tr\|Q0WQK2\|ZDHC9_ARATH	2.00E-167	Probable protein S-acyltransferase 7
trEMBL	tr\|G7J3C1\|G7J3C1_MEDTR	0	S-acyltransferase {ECO:0000256\|RuleBase:RU079119}

Sequence

Transcript Sequence

>Glyur000139s00009304.1
AAAAAATAAAATAAAATAAAAGAAAGAGGAAGCCGCCTCTGCCCTTTGACATAATAGTTGTACTTATTATTTGTGCTTGTTCGTTCCATTCACATTCTCATAAACAACAAGAAATGAATACGGTGCAGCCTCCGGCGCCGGCACCGGAAAACTCAGACGGTGGCAGTGCTATTGGTCCTTCGCTGATCAGAACTTACCGCGCTTGGAAAGGCAATAACCAATTTTTACTTCAAGGGAGGCTTATATTTGGACCCGATGTGAAATCTATANTTATGACAATATTTCTCATCGTTGCCCCGGTTGCTGTTTTCTGTGCTTTTGTGGCTCGAAAACTGNTGGATGATTTTCCTCATCACTCTGGATATTCAGTGCTGGTCATAGTTATTGTTCACACAATTTTTGTTCTGATCACCCTTCTACTGACCTCAGGAAGAGATCCTGGCATAGTCCCTCGTAATTCTTATCCTCCAGTGCCAGATGATTATGATGGGAGTGCCAATTTCAACAATGGNCAAAACCCAGGGCTACATTTGCCCCGTTCCAAGCAAGTAATTGTCAATGGAGTATCTGTAAAAGTAAAATATTGTGATACCTGCATGCTGTATAGACCTCCCCGCTGTTCTCATTGTTCGGTATGTGATAACTGCGTGGAGCGATTCGATCATCACTGCCCATGGGTGGGTCAGTGTATTGGATTGCGAAATTACCGGTTCTTCTACATCTTTGTTTTCTCTGCAACCCTTCTTTGCATATATATTCATGGNTTTTGCTGGGTCTATATCAAGAGGATCATGAACTCAGAGGAGATATCAATTTGGAGAGCAATGACCAAAACCCCTGCTTCAATTGCACTAATAATATACAGTTTCGTTTCTGTCTGGTTTGTTGGAGGCCTCACTGTTTTCCATACATATCTAATCAGCACAAACCAGTCTACTTATGAAAATTTTAGATACCGGTATGACCGAAATGTCAACAACCCTTATGACAAAGGGGTAGCTAGGAACTTCAAAGAAATATTCTGCACNGTCATTCCTCCATCCAAGAACAAATTCAGGTCTAAGGTTCCAATTCCTAAAGAGCTGTCAGAGTCATCTCAAAGAAAGGGTGTTGATACCCTGAAACTAGGGATGCCAGTTTACAATGAGGTTGAGGAGGAGGAAAGAGATTATNGTAAAGATGGTTTCACCAATGATGAGGAACTTGGCAAGGGGAGTGAATTAACTGATGTGTCCGTGGACTTAAGCAGGATGCTTGACACAGAAAGTGGGCAGAGACAAGTTGCTTCATTTCTAAGGGACTCGTTATGGGAAAGAAGCAGCGGAAAATGGGACATAGCTCCTGAAGTTGTGGACGAGATACATGAAGTTGGAGAATCAAAACGGGTCCCCAGTGACAGTAGTAATGAGCCTAATGGCAACTCAACAAAAATGTCTTCATAATTTTTTCAGAAAATTTCAAAGATGTAAATTAAAATTACACAAAAAAAAGTTGGGCGTGGGACTGAGTTTGTTGGGTTGGGATTGATAGGGAAACTTGTGTTCAAAGATGTAAATCTAGTGCGTGTTGTTTTGGTTAAAGAATGACATTGGACCCTCTTTATTGATTGTTGGATAGTTTCTTTTTTGTTATTCTGTGGTGATCTAGTTCTTTTAAAAGGGGAANTTGTGTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00139	294054	297901	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K16675	ZDHHC9_14_18	EC:2.3.1.225	Hippo signaling pathway -fly	map04391

Gene Ontology

molecular_function
GO:0008270 zinc ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000139s00009304.1	PF01529.15	zf-DHHC	100	280	2.30E-40

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.128
SRR1783600	control	3.148
SRR1783602	moderate drought stress	4.463
SRR1811619	moderate drought stress	4.590

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.791
DRR006520	Root Summer glycyrrhizin high producing strain	4.572
DRR006521	Root Winter glycyrrhizin high producing strain	18.654
DRR006522	Root Winter glycyrrhizin high producing strain	18.174
DRR006523	Root Summer glycyrrhizin low producing strain	8.645
DRR006524	Root Summer glycyrrhizin low producing strain	8.400
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.719
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.748

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	25.880
SRR2868004	Drought Stress (root)	43.502
SRR2967015	Control (root)	36.693

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.467
SRR9715740	Leaf	4.571
SRR9715741	Leaf	11.402
SRR9715739	Root	1.820
SRR9715742	Root	3.795
SRR9715743	Root	2.680

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	20.848
SRR8749028	MeJA induced 9h	42.275
SRR8749029	MeJA induced 9h	22.306
SRR8749030	Uninduced	110.995
SRR8749031	Uninduced	142.563
SRR8749032	Uninduced	68.801

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	16.213
SRR8400027	Control - Root	12.181