Gene detail information of Glyur000139s00009302 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50810.1 | 4.00E-22 | translocase inner membrane subunit 8 |
| NR | XP_004501728.1 | 6.54E-47 | PREDICTED: mitochondrial import inner membrane translocase subunit TIM8-like [Cicer arietinum] |
| Swissprot | tr|Q9XGY4|TIM8_ARATH | 3.00E-28 | Mitochondrial import inner membrane translocase subunit TIM8 |
| trEMBL | tr|I1JXN3|I1JXN3_SOYBN | 3.00E-46 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G37570.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00139 | 290780 | 292253 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000139s00009302.1 | PF02953.10 | zf-Tim10_DDP | 12 | 77 | 5.80E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.663 |
| SRR1783600 | control | 10.646 |
| SRR1783602 | moderate drought stress | 12.887 |
| SRR1811619 | moderate drought stress | 13.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.010 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.974 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.267 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.033 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.498 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 27.421 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.442 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 59.338 |
| SRR2868004 | Drought Stress (root) | 38.594 |
| SRR2967015 | Control (root) | 34.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.171 |
| SRR9715740 | Leaf | 30.550 |
| SRR9715741 | Leaf | 22.939 |
| SRR9715739 | Root | 17.438 |
| SRR9715742 | Root | 24.549 |
| SRR9715743 | Root | 20.522 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 75.484 |
| SRR8749028 | MeJA induced 9h | 32.889 |
| SRR8749029 | MeJA induced 9h | 57.955 |
| SRR8749030 | Uninduced | 9.386 |
| SRR8749031 | Uninduced | 3.459 |
| SRR8749032 | Uninduced | 9.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.134 |
| SRR8400027 | Control - Root | 39.162 |