Gene detail

Gene detail information of Glyur000139s00009298.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G50860.1	0	Protein kinase superfamily protein
NR	XP_004501733.1	0	PREDICTED: probable serine/threonine-protein kinase At1g54610-like isoform X1 [Cicer arietinum]
COG	YP_003371239.1	6.00E-21	serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Swissprot	tr\|Q9ZVM9\|Y1461_ARATH	0	Probable serine/threonine-protein kinase At1g54610
trEMBL	tr\|I1KBZ2\|I1KBZ2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G17460.1}

Sequence

Transcript Sequence

>Glyur000139s00009298.1
CCCACTCACAGCCACAGCCACCATTTAACTGACAACACCAGCTCAGACTTTCAGACGCAGTGGCATTTCCGTTATTTCCTCTCCATGCTGGTGCCGTTTCTTCAAGGTGCATGCGTAGCACACAATCACACCCTCCCCAACACCAATTCACAACCCAGGCATTCACACTAATCTGAACTCGCTACTTAGTCCAACTCAGTCACACCCATCAACAAAAGCTTATAGCTTTTTAGTTTTTCCCTCTTCGGAGAAACCACCGTCGCTCGCNGCCGAACACGACGGCAATTTTTGCGACCAGCTCGTCTTTTATTTTTCCGATTCCATGTGTTTTTCATACTCTGCCTCCGCCGCCGTACGCCGCCTCACTTGACGAATGGGTTGCGTGCTCGGGACGCCGGCCGGTGATGGAGCTCAGCGCCGCCGTCGCCGGAGTGGCCAGAGTAACGTTGNTTCCGACGGAGGTAATAATAATGCCGTTAGGGTTCGGGAGAGGCAAACGAATCGGCACACCGGTGATTTTCCGAGGACTCTTCCGGCGCCGGAGCGGCGGAAACCTAGGCTCGATCCATGCGCGGTGACTCCACAGGGTTGGCCGTCTTGGTTGATGGCCGTCGCCGGCGACGCAATCGGCGATTGGACTCCCCGTCGCGCCAACACGTTCGAGAAGCTTGCTAAGGCTAAAGACCTTGTTACGGGGAAGATTGTGGCTTTGAAGAAAGTTAGATTTGATAATTTGGAGCCAGAGAGTGTGAAGTTCATGGCAAGAGAGATAGTTGTTTTGAGGAAGCTTGATCACCCCAANGTCGTGAAGCTTGAGGGATTGGTTACTTCTAGAATGTCATGCAGTCTTTACTTGGTGTTTGAGTATATGGAACATGATCTTGCAGGGCTTGCAGCTGGCCAAGGTGTTAAGTTCACCGAACCTCAGGTCAAATGCTTTATGAAGCAATTACTTTCTGGTCTTGAGCATTGCCACAGTCGAGGTGTATTGCACCGTGATATCAAGGGTTCCAATCTGCTTATTGACAATGAAGGAGTCCTTAAAATTGCAGATTTTGGACTGGCAACTTTCTATGATCCTAGGCAAAAGCAATCCATGACAAGCAGAGTTGTGACCCTTTGGTATCGCCCCCCTGAGCTTCTTCTTGGGGCTACATCTTATGGTGTAGGTATTGACCTTTGGAGTGCTGGTTGCATCTTGGCAGAGCTGCTTGCTGGAAAGCCAANCATGCCTGGCCGAACAGAGGTTGAACAACTGCACAAAATATTTAAGTTGTGTGGCTCTCCATCTGAGGAATATTGGAAGAAGTATAGATTGCCAAATGCNACACTCTTTAAGCCACAGCAGCCATATAAGCGTTGTATCTCAGTAACATTCAAGGATTTTTCTCCATCTTCGCTACCTCTAATTGAAACTCTCCTTGCAATAGATCCCGATGATCGTGGCACTGCCTCAGCTGCTCTAAATAGTGAATTCTTTACCACTGAGCCATNTGCTTGTGAACCGTCAAGTTTGCCAAAGTATCCTCCCAGCAAAGAATTGGATGTAAAACTGAGAGATGAAGAAGCTAGAAGGCAAAAAGCACTTAATGGAAAGGCTAATGCAGTTGATGGTGCCAAAAGAGTCAGAGCACGTGAGCGTGGTCGGGCCATTCCAGCCCCGGAAGCCAATGCAGAGATCCAAACAAACTTAGATAGGTGGAGAGTTGTGACCCATGCAAATGCAAAAAGCAAGAGTGAGAAATTCCCACCTCCTCATCAAGATGGAGCTGTTGGGTATCCACAGGATGCATCAAATAAAGCACCTGTTTCGTTTGGTGCCCCTGACACTTCCTTTGATTCGGGGATATTTAATAGTAAAAAACCATCAGGGCCNGTTAGAAGTCATGATGCTGGGGGAGGACCTCACAGAGGGACTAAAACTAGAAACGAAGATTCCCAGATGGCATCATCGTGGAAATTCATGCGTCCATTCAAGCCATCAACAATTGGACTTTCAATGGATTTATTATTTAGGAGCAAATAATCGGTTTCATTTGATTTTGGGCATATCCTATATAATGAGGAAAGGAATGGGTTAGGCCTTGATACACCTTTTTGGCATTTTGCGGTGGTTTTCAATTTTTTCTTCCAAGTGTTTCTCNTATTTTTTGGTATTTCATTTGGCATAAAGTTGTTGCTGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00139	265029	269567	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.5.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000139s00009298.1	PF00069.20	Pkinase	99	369	2.10E-58

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	16.882
SRR1783600	control	16.859
SRR1783602	moderate drought stress	16.941
SRR1811619	moderate drought stress	16.522

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	16.405
DRR006520	Root Summer glycyrrhizin high producing strain	16.240
DRR006521	Root Winter glycyrrhizin high producing strain	19.649
DRR006522	Root Winter glycyrrhizin high producing strain	19.361
DRR006523	Root Summer glycyrrhizin low producing strain	29.652
DRR006524	Root Summer glycyrrhizin low producing strain	29.888
DRR006525	Leaf Summer glycyrrhizin high producing strain	18.966
DRR006526	Leaf Summer glycyrrhizin high producing strain	18.858

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	27.370
SRR2868004	Drought Stress (root)	33.151
SRR2967015	Control (root)	26.640

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	18.314
SRR9715740	Leaf	23.366
SRR9715741	Leaf	20.278
SRR9715739	Root	15.823
SRR9715742	Root	15.178
SRR9715743	Root	14.928

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	16.893
SRR8749028	MeJA induced 9h	24.124
SRR8749029	MeJA induced 9h	11.929
SRR8749030	Uninduced	16.593
SRR8749031	Uninduced	4.382
SRR8749032	Uninduced	4.129

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	23.886
SRR8400027	Control - Root	23.914