Gene detail information of Glyur000139s00009296 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G26890.5 | 2.00E-69 | |
| NR | KHN31274.1 | 0 | Protein FAM214B-like protein [Glycine soja] |
| trEMBL | tr|I1JXN8|I1JXN8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G37640.6} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00139 | 257692 | 262150 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000139s00009296.1 | PF13915.1 | DUF4210 | 363 | 420 | 4.60E-16 |
| Glyur000139s00009296.1 | PF13889.1 | Chromosome_seg | 589 | 671 | 3.30E-23 |
| Glyur000139s00009296.2 | PF13915.1 | DUF4210 | 363 | 420 | 4.60E-16 |
| Glyur000139s00009296.2 | PF13889.1 | Chromosome_seg | 589 | 671 | 3.30E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.263 |
| SRR1783600 | control | 1.273 |
| SRR1783602 | moderate drought stress | 3.354 |
| SRR1811619 | moderate drought stress | 3.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.265 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.307 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.996 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.706 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.885 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.030 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.436 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.255 |
| SRR2868004 | Drought Stress (root) | 8.419 |
| SRR2967015 | Control (root) | 12.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.332 |
| SRR9715740 | Leaf | 8.135 |
| SRR9715741 | Leaf | 6.243 |
| SRR9715739 | Root | 0.052 |
| SRR9715742 | Root | 0.215 |
| SRR9715743 | Root | 0.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.240 |
| SRR8749028 | MeJA induced 9h | 0.074 |
| SRR8749029 | MeJA induced 9h | 0.477 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.164 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.294 |
| SRR8400027 | Control - Root | 2.626 |