Gene detail information of Glyur000139s00009292 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50915.2 | 2.00E-32 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_007137888.1 | 5.54E-138 | hypothetical protein PHAVU_009G164300g [Phaseolus vulgaris] |
| Swissprot | tr|Q93W88|BH137_ARATH | 5.00E-41 | Transcription factor bHLH137 |
| trEMBL | tr|V7AW58|V7AW58_PHAVU | 2.00E-138 | Uncharacterized protein {ECO:0000313|EMBL:ESW09882.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00139 | 223590 | 226490 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.476 |
| SRR1783600 | control | 2.283 |
| SRR1783602 | moderate drought stress | 111.490 |
| SRR1811619 | moderate drought stress | 109.649 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.784 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.698 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.336 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.363 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.206 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.037 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 67.898 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 67.509 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.901 |
| SRR2868004 | Drought Stress (root) | 10.062 |
| SRR2967015 | Control (root) | 10.927 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 47.293 |
| SRR9715740 | Leaf | 54.011 |
| SRR9715741 | Leaf | 86.306 |
| SRR9715739 | Root | 0.082 |
| SRR9715742 | Root | 2.167 |
| SRR9715743 | Root | 1.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.594 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.143 |
| SRR8400027 | Control - Root | 5.265 |