Gene detail information of Glyur000139s00009265 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40200.1 | 4.00E-24 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_007163561.1 | 2.61E-116 | hypothetical protein PHAVU_001G244500g [Phaseolus vulgaris] |
| Swissprot | tr|Q9XEF0|BH051_ARATH | 8.00E-28 | Transcription factor bHLH51 |
| trEMBL | tr|V7D1Z3|V7D1Z3_PHAVU | 1.00E-116 | Uncharacterized protein {ECO:0000313|EMBL:ESW35555.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00139 | 12209 | 13649 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.701 |
| SRR1783600 | control | 19.769 |
| SRR1783602 | moderate drought stress | 12.511 |
| SRR1811619 | moderate drought stress | 12.643 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 38.669 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 37.973 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.327 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.214 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 45.554 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 46.851 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.089 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.385 |
| SRR2868004 | Drought Stress (root) | 27.475 |
| SRR2967015 | Control (root) | 30.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.909 |
| SRR9715740 | Leaf | 14.326 |
| SRR9715741 | Leaf | 18.205 |
| SRR9715739 | Root | 5.508 |
| SRR9715742 | Root | 20.086 |
| SRR9715743 | Root | 17.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.920 |
| SRR8749028 | MeJA induced 9h | 0.728 |
| SRR8749029 | MeJA induced 9h | 0.551 |
| SRR8749030 | Uninduced | 1.495 |
| SRR8749031 | Uninduced | 0.092 |
| SRR8749032 | Uninduced | 0.216 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 49.999 |
| SRR8400027 | Control - Root | 75.995 |