Gene detail information of Glyur000139s00009263 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00139 | 7860 | 9146 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000139s00009263.1 | PF05162.8 | Ribosomal_L41 | 1 | 25 | 1.30E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 130.365 |
| SRR1783600 | control | 137.874 |
| SRR1783602 | moderate drought stress | 171.645 |
| SRR1811619 | moderate drought stress | 169.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 56.959 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 49.799 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 44.090 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 40.587 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 51.610 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 51.204 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 48.566 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 46.786 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 96.293 |
| SRR2868004 | Drought Stress (root) | 72.220 |
| SRR2967015 | Control (root) | 54.526 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 36.204 |
| SRR9715740 | Leaf | 41.087 |
| SRR9715741 | Leaf | 28.277 |
| SRR9715739 | Root | 29.849 |
| SRR9715742 | Root | 31.293 |
| SRR9715743 | Root | 24.929 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 84.938 |
| SRR8749028 | MeJA induced 9h | 26.516 |
| SRR8749029 | MeJA induced 9h | 66.533 |
| SRR8749030 | Uninduced | 21.168 |
| SRR8749031 | Uninduced | 13.950 |
| SRR8749032 | Uninduced | 14.695 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 92.582 |
| SRR8400027 | Control - Root | 98.531 |