Gene detail information of Glyur000138s00011684 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01970.1 | 2.00E-69 | |
| NR | XP_003552334.1 | 0 | PREDICTED: uncharacterized protein LOC100819083 [Glycine max] |
| trEMBL | tr|I1N3C4|I1N3C4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G45020.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00138 | 204856 | 208813 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.695 |
| SRR1783600 | control | 5.751 |
| SRR1783602 | moderate drought stress | 3.648 |
| SRR1811619 | moderate drought stress | 3.532 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.856 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.034 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.777 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.485 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.025 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.718 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.298 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.088 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.241 |
| SRR2868004 | Drought Stress (root) | 15.227 |
| SRR2967015 | Control (root) | 12.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.318 |
| SRR9715740 | Leaf | 1.697 |
| SRR9715741 | Leaf | 1.633 |
| SRR9715739 | Root | 1.269 |
| SRR9715742 | Root | 6.331 |
| SRR9715743 | Root | 5.629 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.708 |
| SRR8749028 | MeJA induced 9h | 0.915 |
| SRR8749029 | MeJA induced 9h | 1.535 |
| SRR8749030 | Uninduced | 4.151 |
| SRR8749031 | Uninduced | 3.648 |
| SRR8749032 | Uninduced | 1.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.730 |
| SRR8400027 | Control - Root | 13.294 |