Gene detail information of Glyur000138s00011682 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G08600.1 | 5.00E-65 | Protein of unknown function (DUF1191) |
| NR | XP_003552332.1 | 6.28E-160 | PREDICTED: uncharacterized protein LOC100818010 [Glycine max] |
| trEMBL | tr|I1N3C2|I1N3C2_SOYBN | 2.00E-160 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G45000.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00138 | 185766 | 186743 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000138s00011682.1 | PF06697.7 | DUF1191 | 36 | 317 | 1.10E-95 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.511 |
| SRR1783600 | control | 5.735 |
| SRR1783602 | moderate drought stress | 2.172 |
| SRR1811619 | moderate drought stress | 2.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.265 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.907 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.342 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.111 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.245 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.659 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.456 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.433 |
| SRR2868004 | Drought Stress (root) | 11.473 |
| SRR2967015 | Control (root) | 13.771 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.627 |
| SRR9715740 | Leaf | 1.973 |
| SRR9715741 | Leaf | 0.934 |
| SRR9715739 | Root | 4.422 |
| SRR9715742 | Root | 3.949 |
| SRR9715743 | Root | 3.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.413 |
| SRR8749028 | MeJA induced 9h | 3.579 |
| SRR8749029 | MeJA induced 9h | 3.963 |
| SRR8749030 | Uninduced | 0.800 |
| SRR8749031 | Uninduced | 0.569 |
| SRR8749032 | Uninduced | 0.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.246 |
| SRR8400027 | Control - Root | 19.589 |