Gene detail information of Glyur000138s00011679 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G08630.1 | 6.00E-91 | Protein of unknown function (DUF3411) |
| NR | KHN29475.1 | 1.86E-167 | hypothetical protein glysoja_005199 [Glycine soja] |
| trEMBL | tr|I1N3B9|I1N3B9_SOYBN | 3.00E-165 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G44970.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00138 | 160732 | 161778 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000138s00011679.1 | PF11891.3 | DUF3411 | 104 | 272 | 1.40E-54 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 245.780 |
| SRR1783600 | control | 245.358 |
| SRR1783602 | moderate drought stress | 263.480 |
| SRR1811619 | moderate drought stress | 239.154 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 243.656 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 241.684 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 126.195 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 125.984 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 164.583 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 167.161 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.653 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.566 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 115.954 |
| SRR2868004 | Drought Stress (root) | 90.295 |
| SRR2967015 | Control (root) | 76.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.003 |
| SRR9715740 | Leaf | 22.830 |
| SRR9715741 | Leaf | 16.035 |
| SRR9715739 | Root | 404.245 |
| SRR9715742 | Root | 317.671 |
| SRR9715743 | Root | 314.804 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 125.135 |
| SRR8749028 | MeJA induced 9h | 102.853 |
| SRR8749029 | MeJA induced 9h | 107.209 |
| SRR8749030 | Uninduced | 26.308 |
| SRR8749031 | Uninduced | 11.096 |
| SRR8749032 | Uninduced | 30.867 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 229.119 |
| SRR8400027 | Control - Root | 230.294 |