Gene detail

Gene detail information of Glyur000138s00011669

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G32070.3	6.00E-82	nuclear shuttle interacting
NR	KHN29481.1	2.99E-162	Acetyltransferase NSI [Glycine soja]
COG	YP_007128243.1	8.00E-61	GCN5-related N-acetyltransferase [Gloeocapsa sp. PCC 7428]
Swissprot	tr\|Q7X9V3\|NSI_ARATH	2.00E-102	Acetyltransferase NSI
trEMBL	tr\|V7B399\|V7B399_PHAVU	5.00E-158	Uncharacterized protein {ECO:0000313\|EMBL:ESW12040.1}

Sequence

Transcript Sequence

>Glyur000138s00011669.1
GTCTGAGACTGAGTGTTGGATTGGGTGGACAAGACACATAGCAATAGCATCTAATCTAATATTCTCAAAAAAAAAATGCCAACCCTCAATCTCAATACTGTTTCTTCTTCGTTCNCAGTTGTTCCGTTTTATGCCAATTATTCACTGTATACTCAAACTCAGTTATTACTTCCCACCAATCTTAATTACCCCTTTGCCACTGCAGCAACCAAAAAGTTCAGGACTTTTCAGCTCAAGGCTGGATTCTGGGAATCAATTACATCTGGGTTGATGAAGAATAACACGACACAGGTCATCGATCCACAGTCTGCAGAAGAAGAAGAAGAAGAAGAACCTCTGCCTCAAGAGTTTGTCCTTGTTGAAAAGACTGAACCTGATGGAACAATTGAGCAGATAATATTCTCTTCGGGTGGAGATATCGATGTTTATGATCTTCAAGCCCTCTGTGACAAGGTAGGGTGGCCGCGTAGGCCATTGTCAAAATTAGCTGCTGCTTTGAAAAATAGCTATATGGTGGCCTCTCTGCATTCTATAAGAAAGTCACCTGGGTCAGAGGGGAATGAACAAAAGAGATTAATTGGCATGGCCCGTGCTACATCAGACCATGCCTTCAATGCCACAATTTGGGATGTCCTAGTTGATCCTGGCTACCAGGGCCAAGGTCTTGGTAAAGCTCTTGTAGAGAAACTGATTCGAGCTCTTTTGCAAAGGGACATTGGTAATATAACTTTGTTTGCAGATAGTAAAGTTGTGGAATTTTATCGGAATTTGGGTTTTGAAGCTGACCCAGAGGGCATAAAAGGCATGTTNTGGTACCCAAATTACTAATTGCATGCAACCCTGTAAAAGCTTACTTATGCTTCTGTTACATTGTTTTACAATCTGAAAGTATACGAAGGGAGCAGCAGTGGTAAGTTTATAATCTGAAATTACAAAAAGATTGGACATCAATCCTGTAATTATTGTGTTAGGTGCTAGCTGCAAGATATTCTTTTTTCCAAAGTGTTAGGCTTTGGCTAAAGAACCAGATTCATACATCAAGTTACTGCACCTTTTTATATGTGAAAAACCCTGACAACGTCAGTTGCTGCTTAATGATTGTGAATTTGTACCTTTTTTAAAAAANGAAAAAAGTTCTTGTCATTTTTGGATGAATGGTTGTATCATCCAAGNTGGTGATTTCTTTGAGCCGAGAACTTTTGATGTCATGTAGCATCTGCAGCAGAGATTTTGGCCCCGTTGGTTTAGTCCAATGACCGAGAATATAACACTCTCAACCATTGGATTAATACAAAGGCCGAAATCTCTGCCGTAAAGATTGCACTGCAAGAAAGAATCAGGATCCGATTTCTTATGTTGTTTGTACTCATGTTTGTACATTGTATTGTCATGATATTAATTGTTATAGGATAATATATGTTTATATATATGGGCATCTGTAGCCATATGTTTATACTGTCTAAATAAAATATGATATCCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00138	121619	126673	+

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0008080 N-acetyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000138s00011669.1	PF00583.19	Acetyltransf_1	163	235	1.10E-13

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.261
SRR1783600	control	6.317
SRR1783602	moderate drought stress	8.918
SRR1811619	moderate drought stress	9.009

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.575
DRR006520	Root Summer glycyrrhizin high producing strain	7.386
DRR006521	Root Winter glycyrrhizin high producing strain	3.939
DRR006522	Root Winter glycyrrhizin high producing strain	3.835
DRR006523	Root Summer glycyrrhizin low producing strain	5.696
DRR006524	Root Summer glycyrrhizin low producing strain	5.351
DRR006525	Leaf Summer glycyrrhizin high producing strain	23.839
DRR006526	Leaf Summer glycyrrhizin high producing strain	22.994

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.505
SRR2868004	Drought Stress (root)	7.706
SRR2967015	Control (root)	7.157

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	29.347
SRR9715740	Leaf	50.305
SRR9715741	Leaf	27.164
SRR9715739	Root	4.707
SRR9715742	Root	3.374
SRR9715743	Root	4.099

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	9.203
SRR8749028	MeJA induced 9h	7.255
SRR8749029	MeJA induced 9h	5.189
SRR8749030	Uninduced	1.557
SRR8749031	Uninduced	0.618
SRR8749032	Uninduced	1.577

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	11.836
SRR8400027	Control - Root	11.945