Gene detail information of Glyur000138s00011646 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01910.2 | 2.00E-05 | |
| NR | XP_004492569.1 | 1.42E-57 | PREDICTED: high mobility group B protein 6-like [Cicer arietinum] |
| trEMBL | tr|V7B2K4|V7B2K4_PHAVU | 5.00E-52 | Uncharacterized protein {ECO:0000313|EMBL:ESW12064.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00138 | 113 | 923 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.758 |
| SRR1783600 | control | 2.686 |
| SRR1783602 | moderate drought stress | 2.381 |
| SRR1811619 | moderate drought stress | 1.811 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.165 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.941 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.008 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.124 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.136 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.891 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.924 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.495 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.742 |
| SRR2868004 | Drought Stress (root) | 4.659 |
| SRR2967015 | Control (root) | 6.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.600 |
| SRR9715740 | Leaf | 0.172 |
| SRR9715741 | Leaf | 0.232 |
| SRR9715739 | Root | 1.774 |
| SRR9715742 | Root | 1.265 |
| SRR9715743 | Root | 1.341 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.444 |
| SRR8749028 | MeJA induced 9h | 2.216 |
| SRR8749029 | MeJA induced 9h | 2.147 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.630 |
| SRR8400027 | Control - Root | 10.597 |