Gene detail information of Glyur000137s00013337 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G45180.1 | 1.00E-29 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | XP_003603362.1 | 7.68E-56 | Proline-rich protein [Medicago truncatula] |
| Swissprot | tr|P14009|14KD_DAUCA | 1.00E-31 | 14 kDa proline-rich protein DC2.15 (Precursor) |
| trEMBL | tr|B7FMX8|B7FMX8_MEDTR | 3.00E-56 | Uncharacterized protein {ECO:0000313|EMBL:AFK47287.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00137 | 206649 | 207026 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000137s00013337.1 | PF14547.1 | Hydrophob_seed | 43 | 125 | 7.00E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.295 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.576 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.993 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.171 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1213.495 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1258.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1083.119 |
| SRR9715740 | Leaf | 574.052 |
| SRR9715741 | Leaf | 190.113 |
| SRR9715739 | Root | 0.110 |
| SRR9715742 | Root | 0.082 |
| SRR9715743 | Root | 0.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.092 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.000 |