Gene detail information of Glyur000137s00013326 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25280.2 | 6.00E-41 | serine-rich protein-related |
| NR | AFK38729.1 | 8.26E-101 | unknown [Medicago truncatula] |
| trEMBL | tr|G7JAF4|G7JAF4_MEDTR | 3.00E-101 | Uncharacterized protein {ECO:0000313|EMBL:AFK38729.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00137 | 126648 | 127325 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 157.081 |
| SRR1783600 | control | 155.875 |
| SRR1783602 | moderate drought stress | 82.857 |
| SRR1811619 | moderate drought stress | 81.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 122.372 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 120.997 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 41.850 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 39.284 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 128.153 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 119.927 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 92.287 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 90.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 53.307 |
| SRR2868004 | Drought Stress (root) | 63.426 |
| SRR2967015 | Control (root) | 74.769 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.541 |
| SRR9715740 | Leaf | 13.483 |
| SRR9715741 | Leaf | 27.210 |
| SRR9715739 | Root | 157.936 |
| SRR9715742 | Root | 60.740 |
| SRR9715743 | Root | 79.451 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 230.748 |
| SRR8749028 | MeJA induced 9h | 202.623 |
| SRR8749029 | MeJA induced 9h | 292.743 |
| SRR8749030 | Uninduced | 537.323 |
| SRR8749031 | Uninduced | 581.945 |
| SRR8749032 | Uninduced | 261.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 101.468 |
| SRR8400027 | Control - Root | 98.548 |