Gene detail information of Glyur000137s00013314 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007011762.1 | 4.69E-18 | Uncharacterized protein TCM_036939 [Theobroma cacao] |
| trEMBL | tr|A0A061GIK5|A0A061GIK5_THECC | 2.00E-18 | Uncharacterized protein {ECO:0000313|EMBL:EOY29381.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00137 | 33763 | 36486 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.731 |
| SRR1783600 | control | 23.400 |
| SRR1783602 | moderate drought stress | 23.087 |
| SRR1811619 | moderate drought stress | 22.586 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 200.438 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 200.692 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 68.101 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 69.993 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 421.521 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 419.290 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 34.623 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 35.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.218 |
| SRR2868004 | Drought Stress (root) | 38.067 |
| SRR2967015 | Control (root) | 106.757 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 187.977 |
| SRR9715740 | Leaf | 124.781 |
| SRR9715741 | Leaf | 161.122 |
| SRR9715739 | Root | 609.039 |
| SRR9715742 | Root | 492.910 |
| SRR9715743 | Root | 478.941 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 249.464 |
| SRR8749028 | MeJA induced 9h | 274.418 |
| SRR8749029 | MeJA induced 9h | 224.953 |
| SRR8749030 | Uninduced | 186.109 |
| SRR8749031 | Uninduced | 166.029 |
| SRR8749032 | Uninduced | 203.786 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 45.767 |
| SRR8400027 | Control - Root | 67.776 |