Gene detail

Gene detail information of Glyur000137s00013313

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G25220.1	5.00E-142	Protein kinase superfamily protein
NR	XP_004498775.1	0	PREDICTED: probable receptor-like protein kinase At1g80640-like [Cicer arietinum]
COG	YP_001958461.1	3.00E-25	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q0V7T5\|Y1864_ARATH	7.00E-139	Probable receptor-like protein kinase At1g80640 (Precursor)
trEMBL	tr\|I1K8Q5\|I1K8Q5_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G06810.1}

Sequence

Transcript Sequence

>Glyur000137s00013313.1
ATGTTATCAGGTATTCAGGTGGAGGAGCAGCAGCACCAAAAGGATTCGCACCAGAAAGTGGTAATAGGTCTCATCGTAGCCAGTTGTGTAGTTGGTGCAGTCATATTTAGTTCATTGTGTTTCTGGATTTATCATAGCAAGTATTCATCAAAATCCAAGAAGNAAAATGTTCAAAGCTCAGATGCAGAGAAGGGGAACAGTAACACCCCAGCACCATTTTTGAGTAAATNCAGTTCCATCGAGTTGGTTGGTACCAAAGGGTCTGTTCCAATAATTGATTATAAGCAAATAGAAAAATCGACCCTTAATTTCAAGAAAAGTAACATCTTGGGTGAGGGCGGTTTTGGGTGTGTTTACAAGGCTCGATTAGGTGATAACTTGGATGTTGCCGTTAAGAAACTACACTGCGAAAATCAAAATGCTGAGAGAGAATTTGAGAACGAGGTGGATTTGTTAAGTAGAACTCAGCATTCAAATATAATTTCTTTACTGGGTTGTAGCATTGATGGCGACACCAGGTTTATTGTGTATGAGTTGATGCAAAATGGATCCTTGGAAGCTCAGTTACATGGACCATCTCGTGGCTCTGGATTGACTTGGCATATGAGGATGAAGATTGCTCTTGACACAGCAAAAGGATTGGAATATCTGCACGAGCACTGTTACCCTGCGGTGATCCATAGAGATATGAAATCTTCTAATATTCTTTTAGATGCAAACTTCAATGCCAAGCTCTCTGACTTTGGTCTAGCCATAACTGATGGGTCCCAAAACAAGAACATTAAACTTTCAGGCACATTGGGGTACGTAGCACCGGAGTATCTTCTAGATGGTAAACTGACGGATAAAAGTGATGTGTATGCTTTCGGGGTTGTGCTCCTGGAGCTCCTATTAGGAAGGAAGCCTGTGGAAAAACTGGCACCAGCTCAGTGCCAATCCATTGTGACATGGGCCATGCCGCAGCTCATTGACAGGTCCAAGCTTCCAAACATAGTGGATCCAGTGATTAAGAATACAATGGATCTCAAGCACTTATACCAGGTTGCTGCTGTAGCTGTGCTGTGCGTGCAACCAGAGCCTAGTTACCGTCCGCTAATCAAAGATGTTCTTCATTCGCTTATCCCTCTTGTACCCGTTGAGCTTGGAGGAACACTCAGAGTTTCACGAGTGACACACACAGCCACTGATAGTTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00137	25269	27856	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.1.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000137s00013313.1	PF00069.20	Pkinase	105	371	5.60E-50

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.226
SRR1783600	control	0.234
SRR1783602	moderate drought stress	0.244
SRR1811619	moderate drought stress	0.264

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.298
DRR006520	Root Summer glycyrrhizin high producing strain	0.204
DRR006521	Root Winter glycyrrhizin high producing strain	0.039
DRR006522	Root Winter glycyrrhizin high producing strain	0.091
DRR006523	Root Summer glycyrrhizin low producing strain	0.429
DRR006524	Root Summer glycyrrhizin low producing strain	0.421
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.593
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.323

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.372
SRR2868004	Drought Stress (root)	4.982
SRR2967015	Control (root)	4.470

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.562
SRR9715740	Leaf	1.042
SRR9715741	Leaf	2.848
SRR9715739	Root	0.338
SRR9715742	Root	1.086
SRR9715743	Root	1.087

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.293
SRR8749028	MeJA induced 9h	3.455
SRR8749029	MeJA induced 9h	1.964
SRR8749030	Uninduced	3.434
SRR8749031	Uninduced	0.949
SRR8749032	Uninduced	1.283

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.271
SRR8400027	Control - Root	3.289