Gene detail information of Glyur000137s00013312


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G31985.15.00E-20Ribosomal protein L39 family protein
NRKHN44040.19.42E-2860S ribosomal protein L39 [Glycine soja]
COGYP_001540041.17.00E-0750S ribosomal protein L39e [Caldivirga maquilingensis IC-167]
Swissprottr|P51425|RL39_MAIZE3.00E-2960S ribosomal protein L39
trEMBLtr|K7W5V0|K7W5V0_MAIZE8.00E-28Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G156027_P02} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold001372274323436+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000137s00013312.1PF00832.15Ribosomal_L399501.50E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control166.288
SRR1783600control164.832
SRR1783602moderate drought stress96.113
SRR1811619moderate drought stress94.317

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain221.779
DRR006520Root Summer glycyrrhizin high producing strain215.392
DRR006521Root Winter glycyrrhizin high producing strain225.256
DRR006522Root Winter glycyrrhizin high producing strain217.556
DRR006523Root Summer glycyrrhizin low producing strain203.495
DRR006524Root Summer glycyrrhizin low producing strain202.411
DRR006525Leaf Summer glycyrrhizin high producing strain114.331
DRR006526Leaf Summer glycyrrhizin high producing strain109.112

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)382.908
SRR2868004Drought Stress (root)285.276
SRR2967015Control (root)261.184

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf262.234
SRR9715740Leaf299.641
SRR9715741Leaf246.228
SRR9715739Root197.873
SRR9715742Root133.687
SRR9715743Root141.120

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h812.857
SRR8749028MeJA induced 9h395.574
SRR8749029MeJA induced 9h737.910
SRR8749030Uninduced208.938
SRR8749031Uninduced136.303
SRR8749032Uninduced243.196

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root394.319
SRR8400027Control - Root350.338

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved