Gene detail information of Glyur000137s00013311.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25190.1 | 9.00E-52 | Integrase-type DNA-binding superfamily protein |
| NR | XP_003522460.1 | 4.79E-95 | PREDICTED: protein PPLZ02 [Glycine max] |
| Swissprot | tr|Q94AW5|ERF03_ARATH | 2.00E-75 | Ethylene-responsive transcription factor ERF003 |
| trEMBL | tr|M5XSZ7|M5XSZ7_PRUPE | 2.00E-95 | Uncharacterized protein {ECO:0000313|EMBL:EMJ24698.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00137 | 15064 | 15788 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000137s00013311.1 | PF00847.15 | AP2 | 7 | 54 | 3.40E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 51.964 |
| SRR1783600 | control | 52.489 |
| SRR1783602 | moderate drought stress | 9.264 |
| SRR1811619 | moderate drought stress | 10.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.088 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.765 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.666 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.372 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.491 |
| SRR2868004 | Drought Stress (root) | 4.434 |
| SRR2967015 | Control (root) | 4.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.127 |
| SRR9715740 | Leaf | 0.078 |
| SRR9715741 | Leaf | 2.250 |
| SRR9715739 | Root | 3.373 |
| SRR9715742 | Root | 1.709 |
| SRR9715743 | Root | 1.439 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.493 |
| SRR8749028 | MeJA induced 9h | 6.763 |
| SRR8749029 | MeJA induced 9h | 5.622 |
| SRR8749030 | Uninduced | 3.776 |
| SRR8749031 | Uninduced | 5.351 |
| SRR8749032 | Uninduced | 3.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 43.810 |
| SRR8400027 | Control - Root | 53.199 |