Gene detail information of Glyur000136s00007962 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_002522637.1 | 3.48E-09 | conserved hypothetical protein [Ricinus communis] |
| trEMBL | tr|B9S9G8|B9S9G8_RICCO | 1.00E-09 | Putative uncharacterized protein {ECO:0000313|EMBL:EEF39724.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00136 | 316005 | 316271 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 146.853 |
| SRR1783600 | control | 143.563 |
| SRR1783602 | moderate drought stress | 138.907 |
| SRR1811619 | moderate drought stress | 134.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.594 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.224 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 257.212 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 252.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 133.602 |
| SRR2868004 | Drought Stress (root) | 57.643 |
| SRR2967015 | Control (root) | 46.632 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 77.060 |
| SRR9715740 | Leaf | 47.342 |
| SRR9715741 | Leaf | 67.393 |
| SRR9715739 | Root | 94.957 |
| SRR9715742 | Root | 28.155 |
| SRR9715743 | Root | 36.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.234 |
| SRR8749028 | MeJA induced 9h | 2.075 |
| SRR8749029 | MeJA induced 9h | 2.379 |
| SRR8749030 | Uninduced | 28.452 |
| SRR8749031 | Uninduced | 78.393 |
| SRR8749032 | Uninduced | 5.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 68.347 |
| SRR8400027 | Control - Root | 41.827 |