Gene detail information of Glyur000136s00007957 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50011.1 | 2.00E-19 | conserved peptide upstream open reading frame 37 |
| NR | XP_007148379.1 | 3.01E-27 | hypothetical protein PHAVU_006G203500g [Phaseolus vulgaris] |
| trEMBL | tr|V7BTK9|V7BTK9_PHAVU | 1.00E-27 | Uncharacterized protein {ECO:0000313|EMBL:ESW20373.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00136 | 296713 | 300309 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 42.504 |
| SRR1783600 | control | 42.608 |
| SRR1783602 | moderate drought stress | 52.177 |
| SRR1811619 | moderate drought stress | 52.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 46.842 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 46.298 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.505 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.223 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 46.204 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 46.321 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.005 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.988 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 74.374 |
| SRR2868004 | Drought Stress (root) | 92.397 |
| SRR2967015 | Control (root) | 76.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.021 |
| SRR9715740 | Leaf | 22.603 |
| SRR9715741 | Leaf | 22.869 |
| SRR9715739 | Root | 11.243 |
| SRR9715742 | Root | 68.421 |
| SRR9715743 | Root | 53.913 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.221 |
| SRR8749028 | MeJA induced 9h | 11.641 |
| SRR8749029 | MeJA induced 9h | 6.267 |
| SRR8749030 | Uninduced | 5.724 |
| SRR8749031 | Uninduced | 1.547 |
| SRR8749032 | Uninduced | 1.860 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 99.749 |
| SRR8400027 | Control - Root | 89.793 |