Gene detail information of Glyur000136s00007948 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007148384.1 | 4.11E-13 | hypothetical protein PHAVU_006G204000g [Phaseolus vulgaris] |
| Swissprot | tr|Q8LCN5|AGP1_ARATH | 7.00E-09 | Classical arabinogalactan protein 1 (Precursor) |
| trEMBL | tr|V7BTL6|V7BTL6_PHAVU | 2.00E-13 | Uncharacterized protein {ECO:0000313|EMBL:ESW20378.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00136 | 255997 | 256371 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 333.111 |
| SRR1783600 | control | 232.186 |
| SRR1783602 | moderate drought stress | 83.784 |
| SRR1811619 | moderate drought stress | 83.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 143.544 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 158.799 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.461 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 81.425 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 80.488 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.248 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.138 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.122 |
| SRR9715742 | Root | 0.059 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 4.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.053 |
| SRR8400027 | Control - Root | 0.030 |