Gene detail information of Glyur000136s00007946 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004486247.1 | 1.09E-19 | PREDICTED: classical arabinogalactan protein 1-like [Cicer arietinum] |
| trEMBL | tr|K7L7C6|K7L7C6_SOYBN | 5.00E-19 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G18891.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00136 | 251373 | 251862 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 55.242 |
| SRR1783600 | control | 58.247 |
| SRR1783602 | moderate drought stress | 37.824 |
| SRR1811619 | moderate drought stress | 37.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 571.632 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 577.079 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.351 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.331 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 952.604 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 965.107 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 234.786 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 245.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 158.119 |
| SRR2868004 | Drought Stress (root) | 139.538 |
| SRR2967015 | Control (root) | 279.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 904.696 |
| SRR9715740 | Leaf | 347.081 |
| SRR9715741 | Leaf | 658.255 |
| SRR9715739 | Root | 1776.793 |
| SRR9715742 | Root | 1215.467 |
| SRR9715743 | Root | 1185.315 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 562.158 |
| SRR8749028 | MeJA induced 9h | 444.786 |
| SRR8749029 | MeJA induced 9h | 396.801 |
| SRR8749030 | Uninduced | 624.166 |
| SRR8749031 | Uninduced | 230.113 |
| SRR8749032 | Uninduced | 431.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 184.202 |
| SRR8400027 | Control - Root | 294.505 |