Gene detail information of Glyur000136s00007923 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G64230.1 | 2.00E-34 | |
| NR | XP_003593210.1 | 4.93E-165 | hypothetical protein MTR_2g008960 [Medicago truncatula] |
| trEMBL | tr|G7INX2|G7INX2_MEDTR | 2.00E-165 | Transmembrane protein, putative {ECO:0000313|EMBL:AES63461.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00136 | 147280 | 150182 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.529 |
| SRR1783600 | control | 22.487 |
| SRR1783602 | moderate drought stress | 29.460 |
| SRR1811619 | moderate drought stress | 28.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.680 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.325 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 51.821 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 51.898 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.196 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.461 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.100 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.878 |
| SRR2868004 | Drought Stress (root) | 59.331 |
| SRR2967015 | Control (root) | 39.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 76.603 |
| SRR9715740 | Leaf | 83.030 |
| SRR9715741 | Leaf | 107.888 |
| SRR9715739 | Root | 22.601 |
| SRR9715742 | Root | 27.334 |
| SRR9715743 | Root | 26.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 42.315 |
| SRR8749028 | MeJA induced 9h | 59.692 |
| SRR8749029 | MeJA induced 9h | 58.211 |
| SRR8749030 | Uninduced | 65.079 |
| SRR8749031 | Uninduced | 115.357 |
| SRR8749032 | Uninduced | 86.761 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.887 |
| SRR8400027 | Control - Root | 32.647 |