Gene detail

Gene detail information of Glyur000136s00007909.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G26730.1	1.00E-66	Leucine-rich repeat protein kinase family protein
NR	XP_004486244.1	0	PREDICTED: probable inactive receptor kinase At2g26730-like [Cicer arietinum]
COG	YP_004644296.1	1.00E-11	serine/threonine protein kinase with PASTA sensor(s) [Paenibacillus mucilaginosus KNP414]
Swissprot	tr\|C0LGR9\|Y4312_ARATH	9.00E-89	Probable LRR receptor-like serine/threonine-protein kinase At4g31250 (Precursor)
trEMBL	tr\|G7INV2\|G7INV2_MEDTR	0	Receptor-like kinase {ECO:0000313\|EMBL:AES63441.1}

Sequence

Transcript Sequence

>Glyur000136s00007909.1
ATGGGGCTTGAAGGAGAGGTCAATGTGAATGCATTCTTTGGCCTTGAAGAGTTNTCTATGCTGAGCTTCAAGAACAACTCTCTAAGGGGAAATGTGATGAATTTCTCCAACAATCACCAAATGAAGTACATTGATTTGTCAGGCAATATGTTACAAGGGTCAATATCAGAATCCCTCTTGAGTCTCAACCTCTTGGAAACCTTGCTTCTGCAAGATAATAGGCTCACTGGTTCAATGCCAGAGTTTAATCAATCAAGTTTGGGTATACTTAATGTCTCAAATAACAACCTTAAAGGCCCAATCCCAACAACAACTACTCTCCAATCAATTGACCCTNCTTTGTACTCTGGAAATCCTAGATTGTGTGGTCCACCTTCTCCTATTTCCTGCAAAACCAAAACCAGCTCCAATTCTCCTATCCTACTACTACCCTTGAATGGCACGGACAACAGTGATGTCCAAAATAAACCTAATGATAAAAAAAGCAACACTTTCTCTATTTTATTAATTTTCAACGTGGTCCTTCTGCTTGCAATTATATTGCTATTGACCCTTTACTTTAACACATCCAGAAAGCTCAACAGAATAGTGAAGGGGCAGATTCCCACACCTTATGGGCAAGAGAAAGATGTGGAGGATATCAGTANTGAGAAGAAAATAGAGATAGGGGAGGGGACAGTGATGACAATAGAAGAGAGAAAAGAACTGATATTCTTCAATGACCAGCTAAGGTTTCAAATGAGGGAACTTCTTAGAGCTTCTGCTGAGTCACTGGGTCACGGAATCATGGGGAATAGTTACAAGGCCATGCTGCATAATGGACCCACCATCGTTGTAAAGAGGCTAAGGGACTTGAAACCACTCAGTAAGGANGAATTTGCAAAGACAGTGCAACTGNTTGCTGATCTGAAGCACCCAAATTTGTTGCCTTTGCTTGCTTACTACCATTCCAGAGATGAGAAGCTGATGCTCTATAGATATGCACAGAACGGAAATCTTTTCTCCCGACTTCATGACGGGAGAGATGGAAACCGGGTTCCATTCAGCTGGAACTCGAGATTATCAGTGGCAAGAAGCGTGGCTCGAGCATTGGAGTACCTGCACCTCAATAGCAGGTTCCATAACAACATTGTCCCTCACGGCAATTTGAGGTCTTCAAACGTTCTATTTGATGAAAACGATGCAGTTCTTGTCTCTGACTTCAGCCTTGCCTCCTTAATAGCACAACCAATAGCAGCTCAGCACATGGTTGTCTACAAGTCACCTGAATATGGGTATGCAAGAAAGGTGACCATGCAATCCGATGTTTGGAGCTATGGTTCCCTTCTGATAGAACTTCTAACTGGGAAAGTTTCTGTTTGCTCAGCCCCACAAGGGACCAATGGGGTGGACCTTTGCAGCTGGGTTCACAGAGCTGTGAGAGAAGAATGGACTGCTGAGATCTTTGACAAGGAAATTTCTNCACAAAAGAGTGCTCTTCCTGGGATGCTAAGGTTGCTGCAGATAGCAATGCGTTGCATTGAGAGGTTCCCAGAGAAACGTCCTGAGATGGGAGAGGTAGTGAAAGAAGTGGAGAAAATACAGGACCATGCACCCTTGATCTCTGAAGATGAGGATGATGTGTCTCGTGATAGGTCTCTAACTGATGATTCCTTTTCAACCAGTAACTCAGGGATTGTTGGAGATGAAAGATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00136	64494	66672	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.13.3

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000136s00007909.1	PF00069.20	Pkinase	256	522	6.80E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.002
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.281
DRR006522	Root Winter glycyrrhizin high producing strain	0.256
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.552
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.537

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.090
SRR2868004	Drought Stress (root)	0.087
SRR2967015	Control (root)	0.232

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.117
SRR9715740	Leaf	0.000
SRR9715741	Leaf	0.129
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.126
SRR8749028	MeJA induced 9h	0.330
SRR8749029	MeJA induced 9h	0.148
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.732
SRR8749032	Uninduced	0.805

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.020
SRR8400027	Control - Root	0.020