Gene detail information of Glyur000136s00007904 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G33500.1 | 2.00E-32 | Protein phosphatase 2C family protein |
| NR | XP_004485562.1 | 0 | PREDICTED: probable protein phosphatase 2C 62-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|Q339D2|P2C71_ORYSJ | 2.00E-34 | Probable protein phosphatase 2C 71 |
| trEMBL | tr|G7INT7|G7INT7_MEDTR | 8.00E-173 | SpoIIE-like protein phosphatase domain protein {ECO:0000313|EMBL:AES63426.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00136 | 32509 | 39019 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.300 |
| SRR1783600 | control | 3.321 |
| SRR1783602 | moderate drought stress | 3.793 |
| SRR1811619 | moderate drought stress | 3.884 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.647 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.585 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.886 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.792 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.279 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.215 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.012 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.325 |
| SRR2868004 | Drought Stress (root) | 7.449 |
| SRR2967015 | Control (root) | 8.643 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.911 |
| SRR9715740 | Leaf | 34.413 |
| SRR9715741 | Leaf | 36.823 |
| SRR9715739 | Root | 1.179 |
| SRR9715742 | Root | 4.503 |
| SRR9715743 | Root | 3.895 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.669 |
| SRR8749028 | MeJA induced 9h | 5.514 |
| SRR8749029 | MeJA induced 9h | 1.294 |
| SRR8749030 | Uninduced | 2.336 |
| SRR8749031 | Uninduced | 0.640 |
| SRR8749032 | Uninduced | 0.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.163 |
| SRR8400027 | Control - Root | 7.850 |