Gene detail information of Glyur000136s00007901 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G13830.2 | 7.00E-15 | DNAJ-like 20 |
| NR | XP_007148428.1 | 1.96E-62 | hypothetical protein PHAVU_006G207700g [Phaseolus vulgaris] |
| COG | YP_001356422.1 | 5.00E-14 | co-chaperone-curved DNA binding protein A [Nitratiruptor sp. SB155-2] |
| Swissprot | tr|Q9SDN0|DNJ20_ARATH | 1.00E-17 | Chaperone protein dnaJ 20, chloroplastic (Precursor) |
| trEMBL | tr|V7BR02|V7BR02_PHAVU | 7.00E-63 | Uncharacterized protein {ECO:0000313|EMBL:ESW20422.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00136 | 22293 | 22814 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000136s00007901.1 | PF00226.26 | DnaJ | 55 | 118 | 3.20E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.003 |
| SRR2868004 | Drought Stress (root) | 0.740 |
| SRR2967015 | Control (root) | 0.502 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.167 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.544 |
| SRR8749028 | MeJA induced 9h | 0.129 |
| SRR8749029 | MeJA induced 9h | 0.432 |
| SRR8749030 | Uninduced | 18.580 |
| SRR8749031 | Uninduced | 6.770 |
| SRR8749032 | Uninduced | 23.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.163 |
| SRR8400027 | Control - Root | 0.000 |