Gene detail information of Glyur000135s00007306.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G03740.1 | 4.00E-160 | BTB-POZ and MATH domain 4 |
| NR | XP_004491160.1 | 0 | PREDICTED: BTB/POZ and MATH domain-containing protein 4-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|Q9SRV1|BPM4_ARATH | 0 | BTB/POZ and MATH domain-containing protein 4 |
| trEMBL | tr|K7KB30|K7KB30_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G44046.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00135 | 156688 | 161029 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | BTB |
| Ubiquitin Family | 3-box |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000135s00007306.1 | PF00917.21 | MATH | 145 | 262 | 3.10E-08 |
| Glyur000135s00007306.1 | PF00651.26 | BTB | 291 | 408 | 2.70E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.934 |
| SRR1783600 | control | 9.926 |
| SRR1783602 | moderate drought stress | 9.634 |
| SRR1811619 | moderate drought stress | 9.758 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.434 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.281 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.485 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.065 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.479 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.430 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.755 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.754 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.166 |
| SRR2868004 | Drought Stress (root) | 16.127 |
| SRR2967015 | Control (root) | 17.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.565 |
| SRR9715740 | Leaf | 11.445 |
| SRR9715741 | Leaf | 11.168 |
| SRR9715739 | Root | 10.081 |
| SRR9715742 | Root | 13.417 |
| SRR9715743 | Root | 11.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.486 |
| SRR8749028 | MeJA induced 9h | 31.706 |
| SRR8749029 | MeJA induced 9h | 27.665 |
| SRR8749030 | Uninduced | 20.014 |
| SRR8749031 | Uninduced | 31.406 |
| SRR8749032 | Uninduced | 25.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.926 |
| SRR8400027 | Control - Root | 13.059 |