Gene detail information of Glyur000135s00007291 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G21070.1 | 5.00E-96 | |
| NR | XP_004491176.1 | 3.62E-149 | PREDICTED: uncharacterized protein LOC101511291 [Cicer arietinum] |
| COG | YP_003549076.1 | 1.00E-13 | hypothetical protein [Coraliomargarita akajimensis DSM 45221] |
| trEMBL | tr|G7K2X4|G7K2X4_MEDTR | 8.00E-143 | Plant/T10F18-100 protein {ECO:0000313|EMBL:AET00039.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00135 | 81401 | 83755 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.963 |
| SRR1783600 | control | 29.159 |
| SRR1783602 | moderate drought stress | 22.275 |
| SRR1811619 | moderate drought stress | 22.263 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 36.415 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 35.908 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.494 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.364 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 45.075 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 47.123 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.563 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.702 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 48.553 |
| SRR2868004 | Drought Stress (root) | 43.815 |
| SRR2967015 | Control (root) | 41.336 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.967 |
| SRR9715740 | Leaf | 9.792 |
| SRR9715741 | Leaf | 13.641 |
| SRR9715739 | Root | 35.518 |
| SRR9715742 | Root | 22.521 |
| SRR9715743 | Root | 25.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.683 |
| SRR8749028 | MeJA induced 9h | 9.025 |
| SRR8749029 | MeJA induced 9h | 9.341 |
| SRR8749030 | Uninduced | 6.181 |
| SRR8749031 | Uninduced | 4.156 |
| SRR8749032 | Uninduced | 5.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 47.138 |
| SRR8400027 | Control - Root | 43.194 |