Gene detail

Gene detail information of Glyur000135s00007284

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G27090.1	Protein of unknown function (DUF630 and DUF632)
NR	XP_003545492.1	PREDICTED: uncharacterized protein LOC778156 [Glycine max]
trEMBL	tr\|I1M7A7\|I1M7A7_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G04590.1}

Sequence

Transcript Sequence

>Glyur000135s00007284.1
GCCAGCCATGGAGTGAAGAGATTCGTTTCCATTGTTCCCTCTCTTTCTCTCTCTCTCCTCTGTAAAATTCTGTTTTTTTCTCCAAATCCCATTTCTGTCAATGATTCTCTTACATGGGTCTTCGCTGAAATCCAAGTCCTCAATGTGCAGCTCTGGTTCACTTCACTGCAGCAGCCTCGATAGAAATCAAGGTCTAGGATTTCCATAAAGGGAAAGCAAAAAGCCTAATTAAGCTAGATTTTGTGGGTAAATGGGGTCCTCCAGCTCCAAAATGGAGGATGATAAGGCACTTCAACTATGCCGTGAGAGGAAGAAGTTTGTTAGGCAAGCACTTGATGGTCGTTGTTCACTAGCAGCTGCACATGTTTCCTATGTTCAGTCACTGAAAAACACAGGAACAGCTCTTAGGAAATTCACTGAATTACCTGAAGCCCCTAATGTTGAGTCTTCTAATGCAACACATGAGCCAACACTTGCTTTAACTGATAGGACACAATCACAACACATAGATGATGCAGCTGAACCACCCCAAACCTTCTCTCCAATAACTCCCTCTCCTCTTAGTTCTAGTAAGTTCCACACAAATCACATGAGACTTAGCAGTGTTTATTCCAAAAAGATTGAGGAAAAACCACCTGTGCCTGTTATAGCAACAGTAACAACATCATCAGGTGTTGCACATAATGGCACTGGATTAATGTCTGAAACAGCAGGATTTGATGACCCTTCTCTTCCAGCTGGAACACCACAATGGGATTTCTTTGGTCTTTTTCACCCCATTGACCATCAATTTTCTTTCCAAGAAGGGAAGGGCATGATGCCTCATGATATGGGGAATGTTGATGATATGCAACTACTAAGGGAGGAGGAAGGGATTCCTGAGTTGGAAGATGATGAAGAGAAGNCTTCTTCTCATGGAAGAGAAGGCTCGAGGGATTCCGAGGATGAGTTTGATGAAGAGCCTACTGCGGAAACTCTAGTTCAAAGATTTGAAAATCTAAATAGATCGGCTAATATCCATGTTCAGGCAAATGGTTTTCCTGNTGACACAACTAAGCCTCTGAAAGGGGATTCAGCTTCTCAAGTGAAATTGGTAAATGGGGAGAAGGGAAACTCTCTTAATGTATCCCCATCAAAGACGGTGCCTACGGTAGCTTTGCTTCCGCCTGAAACAAATAAACCAATGGAGAAGGAGAATCAGAGTGAAAATAAAGTCACCCCTAAGAATTTCTTTTCCAGCATGAAAGATATTGAGCTTCTCTTTATTAAAGCTTCAGAATCTGGTAGAGAAGTTCCAAGGATGCTTGAAGCAAATAAATTTCACTTTCGACCGATATTCCCTGCAAAAGAGAATGGTTCTGTGGCATCCTTATTTTTTAAGGCGTGTTTCTCATGTGGGGAAGACCCCAGTCAAGTTCCAGATCCAGAAGAACCTGCTCAAAACTCGGTTAAGTACTTAACTTGGCATAGGACAGCATCGTCTCGATCCTCCTCCTCCAAAAACCCTCTGGATGCAAACTCAATAGACAATTTAGAGGATGTCACAAATAATCTCTTTGATAATTCCTGTATGATCTCTGGAAGCCATGCATCAACCTTGGATAGGCTATATGCTTGGGAAAGGAAGCTCTACGATGAAGTGAAGGCTAGTGAGATTGTCAGAAAAGAATATGACACGAAGTGTAAAATCTTAAGGAATCTGGAATCAAAAGGAGAAAAGACCTCCACAATTGATAAAACTCGCGCTACAGTCAAGGATCTGCATTCGAGAACCAGGGTTGCACTTCACAGGATAGACTCTATATCAAAGAGGATTGAGGAGTTACGGGACAAAGAGCTTCAGCCACAACTTGAGGAGTTGATTGAAGGGTTAAATCGGATGTGGGAAGTGATGCATGAATGCCACAAGCTTCAGTTTCAGATTATATCAGCATCATATAACAACAGCCATGCNAGAATTGCCATGCACTCTGAACTACGTAGGCAGATTACCGCCTATCTCGAAAACGAACTCCACTTTCTGTCATCAAGCTTTACTAAGTGGATTGGAGCTCAGAAATCCTATCTGGAGGCTATAAAGGGTTGGGTTCAAAAATGTGTTCCTTCTCAAAAAAAATCATCCAGGAGAAAAACAAGGACGCAATCTGAACTTCTTAGACACTATGGCCCTCCAATATATACCACCTGTGAGGTCTGGTTGGAAAAGCTCGGTATGTTACCTGCCAAGGATGTCGCAGATTCTATCAAGAGTTTAGCGGCTGATACTGCCCGGTTCTTACCATATCAAGACAAGAACCATGGAAAAGGTGCTCATTGGAAGGCTGATATTGGTGGTGAATCAGCAGATGGTTTATTGAGAGATGACATCTCAGAGGATTGGGTTTCGGGTTTCGATCGATTCAGGGCAAGCTTGATTCGATTTCTCGGTCAGTTAAATAGCTTATCCGGTTCTTCTGTCAAAATGTACACAGAACTTAGACAGGCCATTCAGGATTCAAAGAGTAATTACAATCGATTGAATTCTCAGTCTCAAAATGGTCATATGAATTCTCAGTCTCGACATGGTCGTCAGAATTCCGAATCTCAAGATGAGCAGCAATCAAAGCCACAATCTCAAGTTGTTTAATTAGTCTGGAAATAAGCATCCAAACAATAAGGGAAGAACCGCGCGAGACGTTGTGGAGTGGCAGAACTATATAGCCTTGTGTTGAGTATACAATAGTCCACTGGATGAAGCATTTGTACATGAAAAAGGATATAATAAAGTCATTGCTGATGATTTGCCACACTTGTTTAGTCCTTTTTAAGAATAGAAGGGAAGCTGATAGGTTGCTTTGGAGAGGGTTGTGAATGGGTGGTTNCATATTGGGTGAGAGCTGTAAGTACTATTAGGTTCTTATGGTGAAGAAATTTGGGGTACAAACACAAACTTGTATGATGCCATTTTTTGTAATCAAATCAAAGAGTTTTATGGCAGGACTTGTATTTTCCTTCTTGATTTTCTTTGCTAATGTCTTTTTTTTTCTTCTTTTATGTCGTGTATATAATTATAGGTTGCTATTTGTTTGAACTAGCTGCAAGACATCTTAGTTTAGCAGTAACTCTTATTAAGGGAAATTGCAGCAACCTCTC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00135	38950	44256	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000135s00007284.1	PF04783.7	DUF630	1	57	1.50E-23
Glyur000135s00007284.1	PF04782.7	DUF632	328	673	3.50E-104
Glyur000135s00007284.2	PF04783.7	DUF630	1	57	1.50E-23
Glyur000135s00007284.2	PF04782.7	DUF632	328	673	3.50E-104

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	14.694
SRR1783600	control	14.634
SRR1783602	moderate drought stress	15.612
SRR1811619	moderate drought stress	15.569

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	20.448
DRR006520	Root Summer glycyrrhizin high producing strain	20.147
DRR006521	Root Winter glycyrrhizin high producing strain	1.389
DRR006522	Root Winter glycyrrhizin high producing strain	1.319
DRR006523	Root Summer glycyrrhizin low producing strain	15.055
DRR006524	Root Summer glycyrrhizin low producing strain	15.245
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.175
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.112

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	9.234
SRR2868004	Drought Stress (root)	6.862
SRR2967015	Control (root)	6.858

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.229
SRR9715740	Leaf	3.694
SRR9715741	Leaf	5.270
SRR9715739	Root	1.392
SRR9715742	Root	10.116
SRR9715743	Root	8.294

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.893
SRR8749028	MeJA induced 9h	2.392
SRR8749029	MeJA induced 9h	2.830
SRR8749030	Uninduced	0.612
SRR8749031	Uninduced	0.321
SRR8749032	Uninduced	0.351

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	11.925
SRR8400027	Control - Root	13.508