Gene detail

Gene detail information of Glyur000135s00007279.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G20770.1	1.00E-59	Ethylene insensitive 3 family protein
NR	KHN38437.1	0	Protein ETHYLENE INSENSITIVE 3 [Glycine soja]
Swissprot	tr\|O24606\|EIN3_ARATH	5.00E-74	Protein ETHYLENE INSENSITIVE 3
trEMBL	tr\|Q9LEN4\|Q9LEN4_CICAR	2.00E-164	Putative uncharacterized protein {ECO:0000313\|EMBL:CAB95830.1}

Sequence

Transcript Sequence

>Glyur000135s00007279.1
ATGATGATGTTTGATGACATGGGGTTTTGTGGTGATTTGGATATGTTTTGTGGTTCCCTNGGGGAAGGGGATATTGCTGTCAGGCAAACTGAACCTGATGCAGGAGTTGAGGATGATTATACTGATGAAGAAATCGATGTGGATGAGCTTGAGCGGAGGATGTGGAGGGACAAAATGCGTCTCAAGCGGTTGAAAGAGCAAACAAAGGCTAAAGAAGGAATTGATGCTGCAAAGCAAAGGCAGTCTCAGGAACAGGCAAGGAGGAAAAAGATGTCAAGAGCTCAAGATGGAATATTGAAGTACATGCTGAAAATGATGGAGGTTTGTAAGGCGCAAGGATTTGTTTATGGGATAATTCCNGAGAAGGGAAAACCGGTGACCGGGGCGTCTGATAATCTTCGTGAATGGTGGAAGGATAAGGTTAGTGAGTATGATGTTGACGGGGTTGAGGATGAGCCAAACTTTGATGTGGAGGACCGGAAACCCGAGAATCTTCATCCATCCAATCTTGGAGTGAGGGGAAGGCTGCCAGTTCAGCAACCTTCTCATCCAATCAANGGAGAGGTTGTCACAAACTTGGACTTCATTCGAAAGAGGAAGATCTCTAGTGACATGGTGATGGATCAGAAAGTTTACACGTGTGAACATCCTCAATGCCCTTACAGCGAAGCTCGCCTTGGCTTCCAAGACAGGTCTTCTAGGGACAATCATCAATTGAGTTGTCCATATAGAACCAGTTCTGCAGATTATGGTGGCCCTAATTTTCATGCTACTGAGGTTAAGCCAGTTATATTCCCACAGTCCTTTGTTCATTCCAATTCTACAGCTCAGCCTGCTAGTTTGGTTCAACCATCGTTTGATCTAACCGGGCTTGGAGTTCCGGAGGATGGACAGAAAATGATTAGCGACCTTATGTCGATCTATGATACAAATGTTTTAGGAAACAAGAACATAAACTCCACCAATTGTGTTGCTGCTGAAAATCAAAACCTTTCTCAGCCCAGCATTCAGCAACAACAGGACAATTTCTTTTCTGGTCAAGGAATGGTGATGGAAGGAAACTTCTTTGCGCGGGAGGAAGGTCAATTTGACCGGTTCAAGGCCATGAACTCTCCTTTTGAAACCAACCACCACAACANCAACAGCAACAATATCCATCTCATGTTTGGTTCTCCATGTGATTTGGCANCCTTTGATTTCAAGGAGGATATACAAGGAATAGGGATGGATACACTTCACAAACAACTAGATGTTTCAATATGGTATCCTTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00135	15044	16861	+

Gene family

Gene family	subfamily
Transcription Factors Family	EIL

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000135s00007279.1	PF04873.8	EIN3	48	143	1.10E-46
Glyur000135s00007279.1	PF04873.8	EIN3	143	238	1.10E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	334.155
SRR1783600	control	334.866
SRR1783602	moderate drought stress	462.243
SRR1811619	moderate drought stress	457.196

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	381.170
DRR006520	Root Summer glycyrrhizin high producing strain	376.724
DRR006521	Root Winter glycyrrhizin high producing strain	436.035
DRR006522	Root Winter glycyrrhizin high producing strain	418.730
DRR006523	Root Summer glycyrrhizin low producing strain	438.693
DRR006524	Root Summer glycyrrhizin low producing strain	439.586
DRR006525	Leaf Summer glycyrrhizin high producing strain	159.669
DRR006526	Leaf Summer glycyrrhizin high producing strain	157.097

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	213.139
SRR2868004	Drought Stress (root)	297.478
SRR2967015	Control (root)	306.421

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	208.650
SRR9715740	Leaf	219.274
SRR9715741	Leaf	294.401
SRR9715739	Root	286.104
SRR9715742	Root	429.942
SRR9715743	Root	398.440

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	261.639
SRR8749028	MeJA induced 9h	320.171
SRR8749029	MeJA induced 9h	309.979
SRR8749030	Uninduced	192.312
SRR8749031	Uninduced	253.495
SRR8749032	Uninduced	220.710

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	242.097
SRR8400027	Control - Root	268.035