Gene detail information of Glyur000134s00009783 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75500.2 | 8.00E-108 | Walls Are Thin 1 |
| NR | XP_004512084.1 | 0 | PREDICTED: protein WALLS ARE THIN 1-like [Cicer arietinum] |
| Swissprot | tr|Q94AP3|WAT1_ARATH | 5.00E-132 | Protein WALLS ARE THIN 1 |
| trEMBL | tr|G7KGA5|G7KGA5_MEDTR | 0 | Nodulin MtN21/EamA-like transporter family protein {ECO:0000313|EMBL:AES95047.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00134 | 238785 | 241670 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000134s00009783.1 | PF00892.15 | EamA | 17 | 106 | 2.60E-06 |
| Glyur000134s00009783.1 | PF00892.15 | EamA | 181 | 309 | 4.80E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.994 |
| SRR1783600 | control | 0.974 |
| SRR1783602 | moderate drought stress | 0.942 |
| SRR1811619 | moderate drought stress | 0.966 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.710 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.986 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.211 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.847 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.608 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.459 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.165 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.545 |
| SRR2868004 | Drought Stress (root) | 7.559 |
| SRR2967015 | Control (root) | 5.135 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.036 |
| SRR9715740 | Leaf | 1.791 |
| SRR9715741 | Leaf | 6.181 |
| SRR9715739 | Root | 0.139 |
| SRR9715742 | Root | 4.076 |
| SRR9715743 | Root | 3.401 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.747 |
| SRR8749028 | MeJA induced 9h | 3.843 |
| SRR8749029 | MeJA induced 9h | 1.232 |
| SRR8749030 | Uninduced | 2.132 |
| SRR8749031 | Uninduced | 1.265 |
| SRR8749032 | Uninduced | 0.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.090 |
| SRR8400027 | Control - Root | 2.062 |