Gene detail

Gene detail information of Glyur000134s00009773

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G36490.1	5.00E-149	SEC14-like 12
NR	XP_004512075.1	0	PREDICTED: sec14 cytosolic factor-like [Cicer arietinum]
Swissprot	tr\|Q94A34\|SFH12_ARATH	0	Phosphatidylinositol/phosphatidylcholine transfer protein SFH12
trEMBL	tr\|A0A072UNZ3\|A0A072UNZ3_MEDTR	0	Sec14p-like phosphatidylinositol transfer family protein {ECO:0000313\|EMBL:KEH27570.1}

Sequence

Transcript Sequence

>Glyur000134s00009773.1
CCGTTGTATGATGTATTGTATATATTTNTATTCTTATCCTATTTGCTAATTCTGAATTGCAGAGGGATTCGCGGTCTTGCTGAGACTTGGTCAGCATTGTCAATGGCGCCTCACTGTCTTTTTTCCCATTTTTCTAAAACTAGCTATTTTCAGGATCACCGATTTTATAATATAACCCCTTCTTCCATAACCACTCTCCTTTCCTTCTCCCTGCTTCCCCCTTTCTCTTTCAAGAGGCAGGGCATTTGGGAGCGCATGCATTTGGTTTTCTGCCCTGTATGGTATGAGTGTTTGATTCTTCTGTCTTTCGTCTCAACTCCTTGTAAAGCCACCAGAAGCAAATCCACCAAAACGACACCATGTCAGGATCTGTTTCTTCTGGGACAGGCTCTTTTAAGCAGAAAGCAATCAATGCCTCAAACATGCTGAGGAATTCATTGACGAAAAAGGGTAAGCGAAGTAGCAAGGTCATGTCCGTTGAAATTGAGGATGTACATGACGCTGAGGAATTCCTAAAGGCTAGGAAATTTGATCTTGAGAAATCAAAGCAAATGTGGTCTGAAATGCTCAAATGGAGGAAGGAATTTGGTGCTGACACTATTGTAGAGGAGTTTGAATTCAAGGAAATTGACGAGGTCTTGAAATATTATCCCCAAGGACATCATGGGGTAGACAAAGAAGGACGACCCGTGTACATAGAGAAACTGGGACAAGTGGATGCCGGCAAGCTGATGCAAGTCACAACCATGGATCGCTATATCAAATACCATGTTAAGGAGTTTGAGAGGACATTTGATGCGAAGTTTGCAGCTTGTTCCATTGCTGCCAAGAAGCACATCGATCAAAGTACGACTATCCTGGATGTGGAGGGAGTGGGGCTTACAAGCTTCAACAAAAATGCTAGGGAACTCCTTACTCGCCTTCAGAAGATTGATGGTGACAACTATCCAGAGACCTTGAATCGCATGTTCATCATCAATGCAGGTTCTGGATTTAGAATGCTGTGGAACACCGTAAAATCCTTCCTTGATCCCAAGACCACAGCAAAAATCCATGTTCTTAGCAACAAGTATCAGAGTAAATTGCTTGAAATTATTGATGAAAGTGAGTTGCCTGAGTTTTTAGGAGGTACCTGTACCTGTGATGATGAAGGAGGCTGTATGCGTTCTGATAAGGGCCCATGGAAAGATCCAGAAATAATGACGCTGGTTCAGAATGGTCATCACAAATGTTCAAGAAAATCTGAGTCTCAAGTTGAGGAAGAGAAAAAAATTTCTGAGGAGAACAAGACTTCCAAGTTGGAGACAAATGTCACCACACAGGTTTCTCCAGTCTCTGATGAGGTCCCTGCTACTAAAGCTTCCAAGCATGAGGACTTAATCCCGGTGGATGATAAACCGGTGGATGAGAAACCTGCTCAGAAGAAAGTCGTCAAGATTGACGCAGCTGTAACATCAACAGAGTTTTCGACTGTGATGAAACGCATGACTGAGTTGGAAGAGAAAATGAGCAACATGAGTCAACAGCCTGCTGCCATGCCACCTGAGAAGGAGGAAATACTGAATGCTACTATAAGTAAAGCAGATGCTTTGGAGGATTCACTTGCTAAGCAAGAGGAGCTTTCGGCTTACGTTGAGAAAAAGAAGAACAAGACGACGAGAGTTGAGACTTCCCAAATGCCCTCTTACATAATTGTTCCAACATGCGAACTTAGTATATTTTCAAAACCACAAGAAGAAAAGGATATGCTCAATATATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00134	171947	176670	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000134s00009773.1	PF00650.15	CRAL_TRIO	92	258	2.50E-34

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.779
SRR1783600	control	1.629
SRR1783602	moderate drought stress	1.521
SRR1811619	moderate drought stress	1.549

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.051
DRR006520	Root Summer glycyrrhizin high producing strain	0.060
DRR006521	Root Winter glycyrrhizin high producing strain	3.542
DRR006522	Root Winter glycyrrhizin high producing strain	3.202
DRR006523	Root Summer glycyrrhizin low producing strain	3.010
DRR006524	Root Summer glycyrrhizin low producing strain	2.853
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.068
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.090

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.125
SRR2868004	Drought Stress (root)	0.258
SRR2967015	Control (root)	0.206

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.559
SRR9715740	Leaf	0.342
SRR9715741	Leaf	0.252
SRR9715739	Root	0.096
SRR9715742	Root	1.760
SRR9715743	Root	1.308

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.193
SRR8749028	MeJA induced 9h	0.095
SRR8749029	MeJA induced 9h	0.248
SRR8749030	Uninduced	0.375
SRR8749031	Uninduced	0.566
SRR8749032	Uninduced	0.367

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.640
SRR8400027	Control - Root	4.996