Gene detail information of Glyur000134s00009770.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G36470.1 | 4.00E-37 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | XP_006574292.1 | 2.67E-96 | PREDICTED: salicylate carboxymethyltransferase-like [Glycine max] |
| COG | NP_924885.1 | 1.00E-08 | cyclopropane-fatty-acyl-phospholipid synthase [Gloeobacter violaceus PCC 7421] |
| Swissprot | tr|Q9SPV4|SAMT_CLABR | 1.00E-58 | Salicylate carboxymethyltransferase |
| trEMBL | tr|K7MH57|K7MH57_SOYBN | 2.00E-130 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G24740.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00134 | 136276 | 140311 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K08241 | E2.1.1.141 | EC:2.1.1.141 | alpha-Linolenic acid metabolism | map00592 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000134s00009770.1 | PF03492.10 | Methyltransf_7 | 38 | 164 | 9.00E-50 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.002 |
| SRR2967015 | Control (root) | 0.691 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.129 |
| SRR9715740 | Leaf | 0.241 |
| SRR9715741 | Leaf | 0.276 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.002 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.055 |
| SRR8400027 | Control - Root | 0.021 |