Gene detail information of Glyur000134s00009766 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G66450.1 | 1.00E-56 | Phosphatidic acid phosphatase (PAP2) family protein |
| NR | XP_003537603.1 | 6.73E-151 | PREDICTED: uncharacterized protein LOC100784545 isoform X1 [Glycine max] |
| Swissprot | tr|Q6NQL6|LPPE2_ARATH | 5.00E-68 | Lipid phosphate phosphatase epsilon 2, chloroplastic (Precursor) |
| trEMBL | tr|I1LHV9|I1LHV9_SOYBN | 3.00E-151 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G07590.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00134 | 115606 | 118695 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000134s00009766.1 | PF01569.16 | PAP2 | 136 | 249 | 1.80E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.951 |
| SRR1783600 | control | 3.977 |
| SRR1783602 | moderate drought stress | 5.062 |
| SRR1811619 | moderate drought stress | 5.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.623 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.401 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.550 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.410 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.800 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.820 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.082 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.063 |
| SRR2868004 | Drought Stress (root) | 10.455 |
| SRR2967015 | Control (root) | 9.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 42.166 |
| SRR9715740 | Leaf | 58.329 |
| SRR9715741 | Leaf | 34.409 |
| SRR9715739 | Root | 5.026 |
| SRR9715742 | Root | 5.073 |
| SRR9715743 | Root | 4.856 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.179 |
| SRR8749028 | MeJA induced 9h | 2.760 |
| SRR8749029 | MeJA induced 9h | 0.757 |
| SRR8749030 | Uninduced | 2.408 |
| SRR8749031 | Uninduced | 1.214 |
| SRR8749032 | Uninduced | 0.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.029 |
| SRR8400027 | Control - Root | 7.933 |