Gene detail

Gene detail information of Glyur000134s00009760

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G36520.1	2.00E-83	Chaperone DnaJ-domain superfamily protein
NR	XP_007156063.1	0	hypothetical protein PHAVU_003G255200g [Phaseolus vulgaris]
Swissprot	tr\|Q9FWS1\|AUL1_ARATH	6.00E-82	Auxilin-like protein 1
trEMBL	tr\|V7CCY1\|V7CCY1_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW28057.1}

Sequence

Transcript Sequence

>Glyur000134s00009760.1
CTGTGTGTGTACTCAGAGAAGCAGAATCAGAGAATCAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAAGCTACATTTTGATGGAAAGTGTAGCGCGTTGTCGGCGACCAAACAAGGCCTCCGCTACGCTTTCCAACAACAACANCAACAACAATGGTGGTGGCTTCTCCGGCAAGAGTCTATACGACGACGTTTACGGAGGCCCACCGAAGTTCGGCGTCACCGGCCTCTCGCCTCGTTTCGAAGACTACGGCGAGATTTTCGGTAGCTTCCACACCGCACGTGCCTCTTCTATTCCGTTGCTGGATCTTCCTGCAGTCCATGAGGCCGAGGCCTTCTTCGATCCCCGAAGCAACGGTTTCAACTACACCGAAGTTTTCGGTGCCCTAGATTTTGCTGTTTCGCACGATAACTTGTTTCACCAACCCACTGGTCTCGGCGAAGAAGCCTGGACTTCGGCAGAAACTGATTCATTCTCTGGAGAGTCNAACCATTCTGGAAACAACCAGAGCGCGTCAAATGGAGATCTGTTCCGGTCTTTCGATGGTGATTCGGAGTTCAACATTTCGTACCTTAAGGTCAATGGTGCAGGCAATGGACATGTGTNGAAGGGGAAAACTCACATGACTCGGCTGCATGCTGTTCCTGGTTTCAGTCAAGTATATGATGAAACTGCACGGTTGCATGGGATTGATCCGTCCTATCAGGTTGCTGATGATATTATCTTCGATACAGAATTCAGTGCAGACAAGCTGAAGGGAAACCACCTGAAGAAAACAATGCCAGGTCGGCATAATTTTACCTCTGGGGAACAGATTTTTGATAGTGATATAAATCTTCAAAGTGGATGTGGCNGAAATGATTCTCATTCCAGTGAGATGTTCATAACTGTGTCTGACATCAGCCTCAGAAGTGTGCTCTTTCAAGTCCCACCCCCCTCTNGTCCACCTCCTGTACTAGATGCAAAAAGTGGGGACACCTATGGATTTCATTCAAATGGCAGCCTGGTTGCTTCTGAAGAGACACCAGATGACAATTCACCACCTTTCTTTGATGTGGAGGTTGATAGGAATTCATCTGGTGCAGCTTCCGCTGATGCTATGAAAGAAACAATGCTTAGAGCTGAAGCTAAGCTTAGGAGTGCCAAAGAATTCAAAGAGAGGAAAAAGGGGGTTCATGAGAGCTGTGTAAAATCAAGTCATGATTTTAAAAATAATGAAGCAAAGATGATTAAGGATAGGTATAGATTAGGTAGTTTGAATGACGAGACAATGCAGGAAAGTTATGATAGAAGACATTCCAAAACGAAAATTTCTGTCACAGATGAAAGACAGAAACCTAGGAAGGCTTCCCCAGAAACTTTGGACGCTTTAGAAGGGAAAATAATTTTAAACATGGTCGAGGAAAAGCACGTGAAGGAATCCANGTCATCTCAAGATTCGGGTAAGAGTTCTGTAGTTGGGCCATTGAAAGAAGAATCTGAATTTTTTGAATTGGAAGGAACAGAAGAATCTGAAATGGTATTTCAGCCCACAAAACTGACTAAGATTTTAGTGCGAGATACCAGAAACCAAGGAAGTGGCCGGAAGGAAAGAGAAACATCTAATATGCAAGAAAAGTATAAAAAAGTAAAAGCAATTGAAGAAAATCATCCGAAGGAGGAATACGAGAAAAGATCTGAAGCAGCAAACGAGGCTTNTGAGCACAACGAAAACATCATGAGATCTGAACCATCTGATGAGAAATGGAGGCAAAGAGAGCATGTGAAGAAGGAAAACGTTGGCAAAATATTTGAGCTGGAAGAGAATGAGAAGAAAGTAAGAATGGTCCTCCAGCATGGAAAAACTGAAAAGAGAGTAACTGAAGCTGACCAATCAGGAATCTTAGAATATGTATCTGAGATGGGACACAAGGAGCATAAAAGTTTCAATATCCAGAAATCCAAAGACGTTGATAGACAAACACCAGATGATGGTCAGATGGGCATGAGGCTTAAGGAAAATGAGAAGAAACCTAAAGAGGTTGAGGAGAAACAACAGAGTGTAAAAGGGCACAAGCAGTCTGCGGAAATGAAAGAAAATGGAAAAACACAAGGTGAAGNTTTTGCCCTGGGACAAGCTGAGTATGAGGAAAATCGGAAAGATTCTGTGGAGCTGGAAGATATTGATGAAAGATCAAAGGAGGCTTTTAAGCAGGATAACACAGGNGAAATAGAGGCTTGCAGAATAGAAAATGAAATGAGATTAAAACAGATTCTTGGCANGGAAGGCGATATAACTTCATCAAATGAGAATAGTCACCTGGAGCAATATGAGAATATGGACAAAGATGTTGGTAGAATGGAAAAGGATAAGGAANTGGACAAAGCTTTGGATGAAATGGAAGGGAATGAAGAAGTAGAAAATATGAAGTTTGCTAAAGCAACTGATGAGACATGGGAAACAGAGAGTGAGGAAAATCTTTTTGCAGCTCAGTCAGCTTCAATNCATGAAGAAAATATTGTAAAACTGGAGCTATCTCTAGAATCTGATGCNGAACAAGAAATTGGAAAGATGAGAACTGAATGCAAAGTTGGAGAAAAGAATTTGGAAGACATAAGGGTGGAAAATCAACTGCCTGATGAAAAAATCAGANCACCTGAAGTGACCCCAGGAGATGCAGAGCATTCAGCAACCCAATCAGGAAGGGTGGATGACACTGTGACAAAGGCTGATTACAGAAGCACAGAAGCATCTGAATCTGCTAGAGTCCAAGAAGCTGTAAATGTCCAGAAATCTGCTCAATGGTTTCATGTTGGTCAATCCACAGAAAGGAAAGAGAAGAGTTTTAATGAAACTCCTGCAACTGTGGTGAAAGATGCTGAAAGGATGAGGAGAGAAAGAGAGTCAGAAAAAGANCATCTTAGAAAGGTAGAAGAGGAGAGAGATAGAGAAAGGGAAAGAGAAAAAGACAGAATGGCTGTTGATAAAGCAATGCTGGAGGCTGAGAGGGAAAGGGAAAGAAAAAAGGATAGGATAGCTGTGGATAAAGCTACTTTTGAGGCTCATGATAGGGCATATGCTGAAGCTTGTGAGAGAGCTGAAAGGGCCGCATTTGAAAGGGCAACTGCAGATGCTCGACATAGAGCACTGGCTGAGGCCAAGGAAAGACTTGAGAAAGTGTGTGCTGAGGCCAGGGAAAAGTTATACATTGATAAGGCAATTATAGAGGCCAGATTGAAAGCAGAACGCGCTGCTGTAGAAAGAGCAACTGCAGAGGCTCAAGAGCGTGCCATGGAAAAGTTAAAGGCTGAGAGGGCTGAATTTGAGTCTAGAGAACGGTTGGAGAGATCTGTATCTGACAATTTTGGGATTTGTTCCAGAAATGGTGGAAGACAAGACTCTTCATCCTCTGATATGCTTGACCCACAGTTTCAGAACTTTAGCTCTTCTGCAGATTCCAGATACCCATATTCACTTTATGGTGCCGCATCTTTTTCTGAGAGATCGGAAAGAGAAGGTGAGTCAGCTCAGAGGTGTAGAGCTAGATTGGAGAGGCATCGCCGAACAGCTGAGCGTGCAGCAAAAGCTTTGGCAGAAAAGAATATGCGTGACCTTCTAGCTCAGAAGGAGCAAGCTGAGAGAAATAGACTAGCAGAGACTCTGGATGCTGAAGTAAGGAGGTGGTCAAGTGGAAAAGAAGGAAACTTACGTGCATTACTTTCTACCTTGCAATATATCCTTGGGCCTGACTCTGGGTGGCAGCCAATCCCATTGACGGAGGTCATTACTTCTGCTGCTGTGAAAAAAGCTTACAGGAAGGCCACCCTCTGTGTCCATCCCGACAAATTACAGCAACGTGGAGCAAGTATTCAACATAAATACACATGTGAAAAGGTCTTCGATCTTTTGAAGGATGCTTGGAACAAATTCAACTCAGAGGAGCGGTAGCTTGTCTGGCAGCCCAGGTCTGTTTCCCTCCTTGTCTCTTGCTAACGTGTATACAAGCTTCACCTCGATCGGGCAGTTCCTTTCCAAGGCACGCGCAGTTCCTCAGTCTGAAACCTTGGTNACTATTGTGTCATAGTCCATGTTCTGTAATAAACTAATAATAGTCTCCAAAATATCTGAATGTACAAAGAAAACTTCAGCCCAAGTACGGTTTCACATGAAACCAAGGAATTCTGAAGTAAATAGATACAACCCAAAACTGGGAATTTTTGTTATTTTAATCAATGTTAATAGAAACACCATGAAACTGAACGAAATTGGTAGGATGCCGCCGAGGCCACTGTTTAGCAAGACANTTTGTTAATACATTACCTATTTGACCATTCTTTAGT

Protein Sequence

>Glyur000134s00009760.1
LCVYSEKQNQRIRERERERERVSYILMESVARCRRPNKASATLSNNNXNNNGGGFSGKSLYDDVYGGPPKFGVTGLSPRFEDYGEIFGSFHTARASSIPLLDLPAVHEAEAFFDPRSNGFNYTEVFGALDFAVSHDNLFHQPTGLGEEAWTSAETDSFSGESNHSGNNQSASNGDLFRSFDGDSEFNISYLKVNGAGNGHVXKGKTHMTRLHAVPGFSQVYDETARLHGIDPSYQVADDIIFDTEFSADKLKGNHLKKTMPGRHNFTSGEQIFDSDINLQSGCGXNDSHSSEMFITVSDISLRSVLFQVPPPSXPPPVLDAKSGDTYGFHSNGSLVASEETPDDNSPPFFDVEVDRNSSGAASADAMKETMLRAEAKLRSAKEFKERKKGVHESCVKSSHDFKNNEAKMIKDRYRLGSLNDETMQESYDRRHSKTKISVTDERQKPRKASPETLDALEGKIILNMVEEKHVKESXSSQDSGKSSVVGPLKEESEFFELEGTEESEMVFQPTKLTKILVRDTRNQGSGRKERETSNMQEKYKKVKAIEENHPKEEYEKRSEAANEAXEHNENIMRSEPSDEKWRQREHVKKENVGKIFELEENEKKVRMVLQHGKTEKRVTEADQSGILEYVSEMGHKEHKSFNIQKSKDVDRQTPDDGQMGMRLKENEKKPKEVEEKQQSVKGHKQSAEMKENGKTQGEXFALGQAEYEENRKDSVELEDIDERSKEAFKQDNTGEIEACRIENEMRLKQILGXEGDITSSNENSHLEQYENMDKDVGRMEKDKEXDKALDEMEGNEEVENMKFAKATDETWETESEENLFAAQSASXHEENIVKLELSLESDAEQEIGKMRTECKVGEKNLEDIRVENQLPDEKIRXPEVTPGDAEHSATQSGRVDDTVTKADYRSTEASESARVQEAVNVQKSAQWFHVGQSTERKEKSFNETPATVVKDAERMRRERESEKXHLRKVEEERDREREREKDRMAVDKAMLEAERERERKKDRIAVDKATFEAHDRAYAEACERAERAAFERATADARHRALAEAKERLEKVCAEAREKLYIDKAIIEARLKAERAAVERATAEAQERAMEKLKAERAEFESRERLERSVSDNFGICSRNGGRQDSSSSDMLDPQFQNFSSSADSRYPYSLYGAASFSERSEREGESAQRCRARLERHRRTAERAAKALAEKNMRDLLAQKEQAERNRLAETLDAEVRRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQHKYTCEKVFDLLKDAWNKFNSEER

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00134	92161	97859	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000134s00009760.1	PF00226.26	DnaJ	1255	1306	5.00E-05

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.760
SRR1783600	control	6.749
SRR1783602	moderate drought stress	4.242
SRR1811619	moderate drought stress	4.294

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.715
DRR006520	Root Summer glycyrrhizin high producing strain	6.789
DRR006521	Root Winter glycyrrhizin high producing strain	0.465
DRR006522	Root Winter glycyrrhizin high producing strain	0.454
DRR006523	Root Summer glycyrrhizin low producing strain	6.504
DRR006524	Root Summer glycyrrhizin low producing strain	6.389
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.924
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.898

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.993
SRR2868004	Drought Stress (root)	7.116
SRR2967015	Control (root)	6.985

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.599
SRR9715740	Leaf	0.130
SRR9715741	Leaf	0.212
SRR9715739	Root	0.378
SRR9715742	Root	1.466
SRR9715743	Root	1.370

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	9.361
SRR8749028	MeJA induced 9h	6.807
SRR8749029	MeJA induced 9h	5.859
SRR8749030	Uninduced	0.658
SRR8749031	Uninduced	0.617
SRR8749032	Uninduced	0.894

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	7.042
SRR8400027	Control - Root	8.173