Gene detail

Gene detail information of Glyur000134s00009747.2

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G66530.2	2.00E-130	Galactose mutarotase-like superfamily protein
NR	XP_004512056.1	0	PREDICTED: putative glucose-6-phosphate 1-epimerase-like [Cicer arietinum]
COG	YP_004754755.1	4.00E-39	aldose 1-epimerase [Collimonas fungivorans Ter331]
Swissprot	tr\|Q40784\|AAPC_CENCI	2.00E-36	Putative glucose-6-phosphate 1-epimerase
trEMBL	tr\|I3SYV6\|I3SYV6_LOTJA	0	Uncharacterized protein {ECO:0000313\|EMBL:AFK45448.1}

Sequence

Transcript Sequence

>Glyur000134s00009747.2
GCACGGTACGAGAGGACAACAACCATAAGAAGTAGTAGTAAAATGAAGGGACCGGAAAAAAAAAATAGAGATTATTGTGACTTGTGAGTGCGTTGGAAACAAATGGCGATGGCTTCTATGGCATTCTGTATCAACACTGTGACCTTTCCGAACCTTGGCCGACCCAACAGGTGTTCTGGAATGGCATTTGCGAGTTNGGGCAACAAAGAAACAACCTCTTTGGGAGTGAGACTCACAGAAGGCGAGGGGAATTTGCCTAAGGTCGTGCTTACTTCACCGGCTGGTAGTGAGGCTGAAATATACCTATTTGGAGGCTGCATTACCTCTTGGAAAGTTCCCNATGGGAAGGATCTCCTATTCGTTCGCCCTGACGCTGTTTTCAATAAGAAGAAACCAATAAGTGGAGGCATCCCACATTGCTTTCCACAGTTTGGTCCTGGTCCAATTCAGCAGCATGGGTTTGCACGGAATATGGATTGGACTGTTGTTGATTCTGAAAATGTGGAAGGAAATCCNGTTGTAACTCTGGAACTGAAGGATGCTCCTTATAGTCGTGCTATGTGGGATTNCAGCTTCCATGCTTTATTCAAGGTCACACTAAATACTAAAAGTCTTTCGACTGAGTTAAAAGTGAAGAATACAGACAATAAGGCATTCTCATTTAATACTGCCTTGCACACATATTTCCGAGCTTCTGTAAGTGGTGCATCAGTTAAGGGGCTAAAAGGTTGCAAAACTCTGAACAAAGATCCAGATCCTAAAAATCCAGTGGAGGGTAGGGAAGAAAGGGATGTGGTCTCTTTCCCGGGATTTGTAGATTGCATTTATCTTGACGCTTCGAATGAGTTGCAACTTGACAATGGCTTGGGTGATTTAGTATCTATCAAGAGCACANACTGGTCAGATGCTGTGTTGTGGAATCCACATCTTCAAATGGAAGCATGTTACAAAGATTTTGTTTGCGTTGAAAATGCTAAGATTGGAAGTGTCCAGCTAGAGCCAGAACAAACTTGGACAGCTGTGCAGCATCTTAGCATTGCTTGAACCGTAACCGTGCTTCTACATCATCAATTATTTTTGTCTCATTTGATTTGTCAACAATATATTTTCTGTATTAATAATTTACTAAGCCACTGATAGTTGGCCTGTGGTGAGCGATTTGATAATTTGCGAGAGGTCATAAAGTCAAACCTCATTACATATCTGTAACATCATTGTAACAAAAAGAAAGTAGTAATAATTTTCTTTTCTTTCATTTTTTTCCACACGATGGAAAACAACTATATTTTTCTCATTTTCATTTCCTCCAATGTTAAACCAATATTATATCTTCCCTGATATATCATCTGTTCGCAATAAGATCAGGCATGTCATATATCTCTTGGATATGTGGANGGGGTCCAGCCCCAGCAAAGAACTCGTGGACAACCCCATTTAGGGTGATGCTACTGCTTCCTGGAGAATTTAGCAGACCTCTATGTTTGATTTGGCTTCTCACTTGAACTGCTTGGCTCCATTCTCCAGCAGAAGCATGAATGCTTGCCAAATGAATATACCGGCCACTATGATCAGGGTCCAATTCAATCAGAATTTGGCCAATCTCTTTTCCTAGCTCAAGATCTTCGTGCAGATGGCAGGCATTGAGCAGTGCTCCCCATATTGCAGCATTTGGCTTTACAGGCATGGAGTCTACAAACTCCTTTGCTTCTTTCAACAACCCTGCGCGACCCAGAAGGTCTACCATGCATCCATAATGTTCCATAGCAGGGTTCATGTTATAAGCAGTGCTCATGCTCTCAAACAGGGACTTCCCTTCTTCAATTAGCCCTGCATGACTACATGCAGTCAGAATTGCAGTGAAAGTGATCGAAGTTGGTTTAATGCCTGCTTTCTGCATTTGGATAAACCAATCTAGAGCTTCTCTTCCCTTTCCATGGACTGCAAAGCCACCAATTATTGCAGTCCATGCACAGACACATTTCTTCTCCAACTTACTGAACACAAGTGTGAATCCACTTCCCTTGCTCCAGTGAACCAAGGCCTGCACATGCTGAAAGAGAGCAACTTAGGGTTATTCTATCAGGTTTGATGCCTGCAACCAGCATTTTCTGNAGAAGTGACAAAGCTTCTTTATGCATGCCTGTCCTAACAAAGCCAACAATCATGGTTGTCCAAGAGATGACATTCTTCTCTGGCATAGCTTTGAAANTCTTGTAGGCCATGTCTACATTTNCGTGTTTTACATACCCGTCAATCANTGTATTCCAGGAAACAATATCTCGCGAGGGAAGCTGATTGAAAAGGACATGTGCAGATTCGATACTGCCTGAAATTGCATAAGCACGGAGGAGGGAGTTTGTGGCATAAACCTCCAAACCAAAACCCCTTTTGATAATTTGAGCATGGATTTGCTGGGTTTCTTCGAAGGCTGAGAGAGCAGAGCATGCTTTGAGAAGGAAAGGGAAAGTGTAAGCATTGTGAGGTATTGAATGGTGAAGCATTTGATGGTACAAAAGCAGGGCTGCTTCTGGGTCATCACTGTTTGAGTATGCCCTGATCATGGTGTTCCACGTGACAGTATTAGGTGAACTTATTCTGTCAAAAACCATACGTGCATAGGCTAAGTTGCCCAACTCTATTGATGCGTATGAAGCCAAGAGCCTGCTTACTGTTATCTGGTGCCTGATGGTGCCTTTTTTCAACAACTGTCCATGAACCTGCTTCAGTTCTTCTATATTTGAACATCTCTCCAGTACAGCCAGGGCCGGCTCCACATTGAGTTGTAGCAGCTGCATACCCACCATTGAGAACCAAGAAATTGAACTAATAAATTTGGAGAAAGGAGAAGAAGATGTTGTTCTGAATCAGTGGCTTTAACTTGTTTACACTAGTTTGGGATAAGATATTTGTAGACCGAACACAACATCTTGTTTTTATCTGGACTTTCCTTTGGCTGTTTCCTTGTGG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00134	20959	26112	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01792	E5.1.3.15	EC:5.1.3.15	Glycolysis / Gluconeogenesis	map00010
			Glycolysis / Gluconeogenesis	map00010

Gene Ontology

biological_process
GO:0005975 carbohydrate metabolic process

molecular_function

GO:0003824 catalytic activity

GO:0016853 isomerase activity

GO:0030246 carbohydrate binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000134s00009747.2	PF01263.15	Aldose_epim	53	310	1.10E-42

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	10.939
SRR1783600	control	10.919
SRR1783602	moderate drought stress	13.834
SRR1811619	moderate drought stress	13.790

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.492
DRR006520	Root Summer glycyrrhizin high producing strain	9.287
DRR006521	Root Winter glycyrrhizin high producing strain	4.401
DRR006522	Root Winter glycyrrhizin high producing strain	4.247
DRR006523	Root Summer glycyrrhizin low producing strain	9.144
DRR006524	Root Summer glycyrrhizin low producing strain	8.972
DRR006525	Leaf Summer glycyrrhizin high producing strain	60.308
DRR006526	Leaf Summer glycyrrhizin high producing strain	60.426

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	21.662
SRR2868004	Drought Stress (root)	12.981
SRR2967015	Control (root)	11.405

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	49.099
SRR9715740	Leaf	74.564
SRR9715741	Leaf	37.704
SRR9715739	Root	5.101
SRR9715742	Root	6.238
SRR9715743	Root	4.830

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	9.041
SRR8749028	MeJA induced 9h	8.477
SRR8749029	MeJA induced 9h	8.779
SRR8749030	Uninduced	7.967
SRR8749031	Uninduced	6.105
SRR8749032	Uninduced	5.557

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	25.824
SRR8400027	Control - Root	32.799