Gene detail

Gene detail information of Glyur000133s00010404

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G08350.1	9.00E-49	GRAM domain-containing protein / ABA-responsive protein-related
NR	KEH21296.1	1.49E-108	GRAM domain protein/ABA-responsive-like protein [Medicago truncatula]
Swissprot	tr\|Q9FTA0\|GEML4_ARATH	1.00E-59	GEM-like protein 4
trEMBL	tr\|A0A072TVV9\|A0A072TVV9_MEDTR	6.00E-109	GRAM domain protein/ABA-responsive-like protein {ECO:0000313\|EMBL:KEH21296.1}

Sequence

Transcript Sequence

>Glyur000133s00010404.1
AAATTTGGAGCCTTAGATTTAAGCTATTGGCCGGAATAAGCATCTCTCATTCTTTGAAGCTTCCCTTGGACAGCTGTTTGCAAAGATTGAAAACAAATCTTTGTATATTTTGAAGAACCAGTTCACAAATCACATTCTTGAAAATTCCATCCACTGATGAATTCTTTTGGTAAAGAAACTGCAAACATGGAGCAGAAGAAAGCAACAAACAGAAAAAGCAGCAATTTTGCATGTAGGATTCATGAACACGTAAAATTGGGTCCTAAACTGTCTGAGACTCTGAAGGGTAAGTTGAGTTTGGGTGCCAGGATAATACAAGAAGGTGGGAGAGGGAACATTTTCAAACACATTTTTGGGGTGCAAGAAGGAGAGCAACTCTTGAAGGCTTCACAATGCTATTTATATACAACAGCTGGCCCTATTGCTGGAGTTCTCTTTATCTCCACCAAAAAGGTTGCATTTTGCAGTGAAAGACCAACAACCTTCTCTTCTGTAACTGGAGAGTTGGTCAAGGCACCTTACAAGGTTTTGATACCAATAGGAAAGATAAAAGAAGTCAATGAAGGGCAGAATGTGAACCAGGCAGAACAAAAGTATGTAGAAATAGTTACTCGTGACGATTCTGAATTTTGGTTTATGGGGTTTCTACGGTATGAGAAAGCTTTCAGGAATCTTCAGAAAGCCATTTCTATGTCCATTCAACTACAAAAAGATACAAATGAACATTGTTTCTCTGATGTTTGAGATGTACATAGTTGTTTGACAAAAGGGGAAGTTCTGTTTTTTCTTTTTTTATAGGCAAATGTTAGTGATTAGTATGTTATGTCAGTGAGGGGATTTGAACTCATGAGATCCTTATGACTCCAATGTAAATGGGATTTCAAGCATTGACAGTCAAGTTAATAGAATTGTAGTTGTCTGTAGTGCATTGTTGCTTCATCCCTTATCCCTTGCCTTGTTGATTAAGAACTTGAGCAATTAAAAGAAATCTTCATCCAATTCTTAATGTAGGAATTCCAATGTAGTACTTAGGAACCAAAACCAAAATTTATTCATGTTACCCCATTTGATAGAGAACAAAGAATTATTATGTAAAGCAGGAATGTCAGTTAGTATAGCAGACTGCTTTAGCAGATGTTTGGGATTTTCTTCTATTTTAATTTTACAAAGAAACTTTTGGGACTGTGAATGTTTGAAAACCCTTGCTTTATT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00133	318197	319905	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000133s00010404.1	PF02893.15	GRAM	62	135	1.70E-13

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.932
SRR1783600	control	7.769
SRR1783602	moderate drought stress	6.347
SRR1811619	moderate drought stress	6.240

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	60.120
DRR006520	Root Summer glycyrrhizin high producing strain	60.370
DRR006521	Root Winter glycyrrhizin high producing strain	7.074
DRR006522	Root Winter glycyrrhizin high producing strain	7.151
DRR006523	Root Summer glycyrrhizin low producing strain	62.672
DRR006524	Root Summer glycyrrhizin low producing strain	62.588
DRR006525	Leaf Summer glycyrrhizin high producing strain	42.752
DRR006526	Leaf Summer glycyrrhizin high producing strain	42.594

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	38.302
SRR2868004	Drought Stress (root)	47.882
SRR2967015	Control (root)	37.646

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	49.996
SRR9715740	Leaf	52.792
SRR9715741	Leaf	79.618
SRR9715739	Root	7.307
SRR9715742	Root	26.681
SRR9715743	Root	20.850

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	84.553
SRR8749028	MeJA induced 9h	44.627
SRR8749029	MeJA induced 9h	99.773
SRR8749030	Uninduced	162.380
SRR8749031	Uninduced	122.820
SRR8749032	Uninduced	117.802

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	18.237
SRR8400027	Control - Root	41.568