Gene detail

Gene detail information of Glyur000133s00010369

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G26570.1	Plant protein of unknown function (DUF827)
NR	AES73288.2	WEAK movement UNDER BLUE LIGHT-like protein [Medicago truncatula]
Swissprot	tr\|O48724\|WEB1_ARATH	Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1
trEMBL	tr\|G7J6D1\|G7J6D1_MEDTR	WEAK movement UNDER BLUE LIGHT-like protein {ECO:0000313\|EMBL:AES73288.2}

Sequence

Transcript Sequence

>Glyur000133s00010369.1
GAAAAAGGAGGGAAGGGGGTAACAGTAACAAACAGGTGGATCTAATCTGTGTGCTGAGGAGACACCATTAGTATCAACCTCAACCCCTCGCACTTTCAATTCCTAGTAAATCCTAATCGGAGTTTAGCCGCTGTTAGCACTCCCGACTTCTCCTTACAATGGAGGATGTTGAAGACAAATTGCCGTTTAACTCCTCTTCAAAAATTGCTGAAGAGACACCACAGTCAGAACATGTTAAGCTACCCTCTGAATCCTATTCAAAATTTACCGAAGAGACACCACTGGCAGAACATGTTGAAGACAAGCTACCCTCTGAATCCTCTTCAAAATTTACTGAAGATACACCACTGCCAGAACATGTTGAAGACAAGCTACCCTCTNTTGAAGACAAGCTACCCTCTGAATCCTCTTCAAAATTTACTGAAGATACACCACTGCCAGAACATGTTGAAGACAAGCTACCCTCTGAATCCTCTCCAAAATTTACCAAAGAGACACCACTGGTAGAACATGTTGAAGACAGGCTACCCTCTGAGTCCTCTTCAAAAATTAGTGAAGAGACACCACTTGCAGAACATGTTGAAGACGAGCTACCCTCTGAATCCTCTTCAAAAATTACTGAAGATACACCACTGGCAGAACCCTCTGAAGAAAATACTGAAGTGACAAACCCACCAGATAATCAATCTTCCACAGAAGCCCCAACTATTCCACTTAGTAATGGAAAAGTGGAGTCTGGCTTTCACTTGCCAGTGAATGAGTTTTCTGAATTATCAGCATCACCAAATGCTTCTGATGGTCACACTATAATACAAGATGAGGGTGTTTCTGTAGGTAATTCAGCTGCAATCCCAGATGCTAAGGTGGGTGTAACAGAAAGAAGCCACCAGGTAACTTCGGTTGAAGATTCTGAACCGGGCGCTGTAGAAGATATCTCTGACAGGCATGAATTGCAGGATGATGTTACTAACATCACTGCTGATAGTTCTGTTGATAATGAGATTAGACTCTCAGCTTCCTCTTCTGAAACAAAAGATTTGCAAAATGATCACTATGAACTAATGGCCATGGGAGCAGTTGACTCACCCACTCAAGCCAAGCTTCAAAGAGGCCTTATTGATACCACAGCTCCATTTGAATCTGTCAAGGAAGCTGTTTCCAAGTTTGGAGGAATTGTGGATTGGAAGGCTCATAGAATCCAGACTGTGGAGAGACGCACTCTTGTAGAGCAAGAACTTGAAAAGGCACATGAGGAGATCCCAGAATACAGAAAACAAGCAGATTCTGCTGAACAGGCAAAAGTTCAAGTACTAAAAGAGCTGGACAGCACAAAAAGACTAATAGAAGAGTTAAAACTTAACCTAGAGAGGGCACAAACTGAAGAGCGTCAAGCGAGACAGGACTCGGAACTTGCAAAGCTCAGAGTGGAAGAGATGGAGCAGGGTATTGCAGATGAATCTAGTGTTGCAGCCAAGGCACAACTTGAGGTTGCTAAAGCTAGGTATACAGCAGCTGTCTCAGATTTAGCAGCCGTGAAAGAGGAGCTGGAAGCATTGCGTAAGGAATACGCTTCCTTAGTGACTGATAGAGATGNAGCTATTAAGAAAGCCGAAGAGGCAGTTGCAGCATCAAAGGAGGTAGAGAAGTCAGTGGAAGATTTAACTATTGAACTAATTGCCACAAAAGAGTCATTGGAGTCTGCACATGCCACACACATGGAAGCAGAGGAACAAAGAATAGGAACAGTCATGGCGAGAGATCAGGATTCTCTCAATTGGGAGAAGGAACTTAAACAGGCAGAAGAAGAGCTACAGAGACTCAATGAGCAAATGTTGTCTGTGAAGAATCTCAAATCTAAACTNGAAACAGCCTCTGCTTTGCTGCTTGATTTGAAAGCTGAATTAACTACTTATATGGAATCAAAGTTAAAGCAAGAAGGTGACGAAGAAGAAATGTCACAAGGAGGCCTAGAAGAACCAGAAAAGAAGACACACACTGAAATACAAGCCGCTGTGGCATCTGCCCGAAAGGAACTTGAGGAAGTAAAACTTAACATAGAGAAAGCAACTGCTGAGGTTAGTTGCTTAAAGGTAGCTGCTACATCATTAAAATCAGAACTTGAACAAGAAAAATCAACTCTTGCCTCCATCAGGCAAAGAGAGGGAATGGCCTCCATTGCAGTTGCATCCCTAGAAGCTGAATTGGACAAGACTAGATCAGAAATAGCTTTGGTTCAGATGAAGGAGAAAGAAGCCAAAGAAAAAATGACTGAGCTTCCGAAGAAGCTACAACTAACAGCTGAAGAGGCTAATCAGGCCAACTTGCTTGCTCAAGCATCTCGTGAAGAGCTGCAGAAAGTCAAGGCAGAAGCAGAGCAAGCCAGGGCTGGGGTAAGTACCTTAGAAAGTAGATTACTTGCAGCTCAAAAGGAGATAGAGGCTGCAAAGGCTTCTGAAAAGTTGGCAATAGCAGCAATTAAAGCATTGCAGGAGAGCGAATCAAATAGAAGCAACAGTGAAGTGGATCCGTCCACTGGGGTAACACTTTCTTTGGAGGAGTACTATGAGCTTAGTAGACGAGCTCACGAGGCAGAAGAGCGAGCCAATATGAGGGTTGCAGCTGCTAATTCTGAAATTGAGATAGCTAAGGAGTCTGAATTGAAATCCTTTGAGAAGTTGGATGAAGTGAATAGAGAGATAGCTACTAGAAGGGAATCCTTGAAGATTGCAATGGAAAAAGCTGAGAAGGCAAAGGAAGGTAAATTAGGTGTAGAACAAGAACTAAGAAGGTGGAGAGCAGACAATGAGCAACGAAGAAAGGCTGGTGAGTCTGGCCAAGGAGTGGTAAACCAGAATAAAAGTCCTAGGGGTAGTTTTGAGGGGAGTAAGGAAGCAAATAATTTCTACCAGGCTCATGATGCAGCTAATCCTGCACATCCCTCGTCAAGTCCAAAGGCTATGCATGCAGAAAATGATGAAAGTGGATCATCACCAGAATCAAAACATGGAAAAAAGAAAAAGAAGCCATTGTTCCCACGGGTTTTGATGTTCTTTGCTAGAAGAAAAACACATTCAACCAAGTCAGGGTAATCCCAAATTGAAATTATATGCATTGTTATGCCGCAATTATCTTACTTCTCATCCTTTTGGAGATCTCAGTGATTTAAAATCCTAGACTACCCAAAGTTGTACCGAACCTGTACATGTTGGTGATCGCTATATGTATGGTTTTGATCGGATTATACTCTCTCTCACTTAAAGGATGGTATACAGTCGCCTGCTCTGTTTTATGCGGATGTAAAAATGAGTTCACCTGTGTTGGGAAAAGAGAAAATAAGATGATTCTGTATTGTGTATAGTCTTCTGATATATTGAACCTCGGCTTCTGTAAAGATTTGTTTTGAGATTCGTTCAAATGAAAAAAAAATTGTGTTTGTGATTTGAAGCGCTTTGAATGGCATGGTGTGTGAATATTGGAAACGCATTAAGTTGATTGATATTGGGAAAAAGCTTCTATTTTGGACCTTCTGGTGCATGGAATATACCATATAAAGGCTCAAGTCGTAGATATTTTTTAAATAATTTATCCAAAGCATTCGTCAAATCTTGAGCCATTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00133	101849	107651	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000133s00010369.1	PF05701.6	WEMBL	323	858	1.30E-208
Glyur000133s00010369.2	PF05701.6	WEMBL	323	858	1.30E-208
Glyur000133s00010369.3	PF05701.6	WEMBL	323	858	1.30E-208

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	24.625
SRR1783600	control	24.940
SRR1783602	moderate drought stress	19.546
SRR1811619	moderate drought stress	19.218

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	23.305
DRR006520	Root Summer glycyrrhizin high producing strain	23.297
DRR006521	Root Winter glycyrrhizin high producing strain	22.212
DRR006522	Root Winter glycyrrhizin high producing strain	21.603
DRR006523	Root Summer glycyrrhizin low producing strain	33.846
DRR006524	Root Summer glycyrrhizin low producing strain	34.119
DRR006525	Leaf Summer glycyrrhizin high producing strain	10.337
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.374

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	27.423
SRR2868004	Drought Stress (root)	28.182
SRR2967015	Control (root)	26.722

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	16.192
SRR9715740	Leaf	14.452
SRR9715741	Leaf	21.347
SRR9715739	Root	2.058
SRR9715742	Root	16.298
SRR9715743	Root	14.523

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	38.732
SRR8749028	MeJA induced 9h	99.939
SRR8749029	MeJA induced 9h	61.867
SRR8749030	Uninduced	28.803
SRR8749031	Uninduced	54.464
SRR8749032	Uninduced	37.152

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	25.763
SRR8400027	Control - Root	23.329