Gene detail information of Glyur000132s00015972


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G51730.15.00E-51saposin B domain-containing protein
NRXP_003623571.17.50E-116Saposin B domain-containing protein [Medicago truncatula]
trEMBLtr|I3SJM4|I3SJM4_MEDTR4.00E-116Uncharacterized protein {ECO:0000313|EMBL:AFK40466.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00132290293294028-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006629  lipid metabolic process



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000132s00015972.1PF05184.10SapB_153892.00E-05
Glyur000132s00015972.1PF03489.12SapB_2941268.50E-05
Glyur000132s00015972.1PF05184.10SapB_11391746.90E-08
Glyur000132s00015972.1PF03489.12SapB_21802132.30E-08
Glyur000132s00015972.2PF05184.10SapB_147831.90E-05
Glyur000132s00015972.2PF03489.12SapB_2881208.20E-05
Glyur000132s00015972.2PF05184.10SapB_11331686.60E-08
Glyur000132s00015972.2PF03489.12SapB_21742072.20E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.054
SRR1783600control18.077
SRR1783602moderate drought stress15.781
SRR1811619moderate drought stress15.630

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.508
DRR006520Root Summer glycyrrhizin high producing strain21.320
DRR006521Root Winter glycyrrhizin high producing strain22.689
DRR006522Root Winter glycyrrhizin high producing strain22.270
DRR006523Root Summer glycyrrhizin low producing strain28.888
DRR006524Root Summer glycyrrhizin low producing strain29.310
DRR006525Leaf Summer glycyrrhizin high producing strain57.966
DRR006526Leaf Summer glycyrrhizin high producing strain56.818

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)28.879
SRR2868004Drought Stress (root)29.552
SRR2967015Control (root)30.590

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf80.697
SRR9715740Leaf101.159
SRR9715741Leaf58.821
SRR9715739Root21.062
SRR9715742Root27.513
SRR9715743Root25.539

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.540
SRR8749028MeJA induced 9h11.713
SRR8749029MeJA induced 9h6.491
SRR8749030Uninduced5.630
SRR8749031Uninduced3.133
SRR8749032Uninduced3.837

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root46.133
SRR8400027Control - Root59.237

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved